Paludisphaera borealis: BSF38_04859
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Entry
BSF38_04859 CDS
T04622
Name
(GenBank) Putative formate dehydrogenase
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
pbor
Paludisphaera borealis
Pathway
pbor00630
Glyoxylate and dicarboxylate metabolism
pbor00680
Methane metabolism
pbor01100
Metabolic pathways
pbor01120
Microbial metabolism in diverse environments
pbor01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pbor00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BSF38_04859
09102 Energy metabolism
00680 Methane metabolism
BSF38_04859
Enzymes [BR:
pbor01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
BSF38_04859
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GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer2_4
NADH-G_4Fe-4S_3
Fer4
Fer4_10
Fer4_7
Fer4_8
Fer4_21
Fer4_2
Fer4_6
Fer4_9
Fer4_18
Fer4_15
TPP_enzyme_M
DUF6898
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
APW63295
UniProt:
A0A1U7CWI7
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Position
complement(6265643..6268600)
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AA seq
985 aa
AA seq
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MSKMTLDGSVRNANVGDRLIDVILSAGIQLPSVCYHPQLGPIQTCDTCMVQVDGKLVRAC
AVEVGEGMEVVTTTPAAAAARREAFDRILGNHLLYCTVCDNNNGNCTVHNTTKLLAVEHQ
KIPFKTKPFQVDNTNPFYRYDPDQCILCGRCVEACQDVQVNETLSIRWEDAHPRVLWDGG
SMIGESSCVSCGHCVTVCPCNALMEKSMLGHAGFFTDLPKSTLDGMIEMVKAVEPEAGYG
AILKASEAEAAMRESRVRRTKTVCTYCGVGCSFDVWTKDRHILKVEPEQGPTNGISTCVK
GKFAWDFVNSQDRLTKPLIREGDAFREASWDEALGLVARRLSEIKAQDGPDALAFISSSK
CTNEESYLMQKLARAVVGTNNIDNCSRYCQAPATVGLFRTVGYGGDSGSMTDIAKADLVL
IVGSNTAESHPVLATRVKRAHKLHGQKLIVADIREHEMARRADVFLRPRPGTDLVWLSAI
SRYLLDQGLAKTAFLDRWVNGLEAYRASLEPFTLEAAERYCGLAAETLKKVAHMIADAPD
VCILWAMGVTQHSMGSDTSTAISNLLLITGNYMRPGTGAYPLRGHNNVQGASDHGAMPNN
LPGYQHVDDPEVRARFEAGWGVKLPTTKGLDNHEMVDAIQDGRLKALYIFGEEMSLVDAN
TNYVQDAFAKLEFFVVQDIFFSETCRFADVVLPAAPSLEKEGTFTSTERRIQRLYQVFDP
LPGSRPDWRIIRDVANHLGANWSYEHPSEIMDEVASLTPLFAGVSYGRLEGYNSLQWPVA
ADGGDQPLLYTEKFAFPDGKARLFPLSWTEPVDQPDEEYDLHLNNGRLLEHFHEGNLTYR
VEGIRRNTPDVFVEVSPELAQERGVQSGTRVELISRYGHVRLRALVTDRVHGKQLYMPMN
STESPVNRLIGSHTDAVTNTPAYKEAAVRMRVLPELDESPMPRGNFRFGNPTPQQGVEVE
RKWSRPDYSIPGIPLVQIQLGPNKE
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagatgaccctcgacggatcagtccggaacgccaacgtcggcgaccgtctgatc
gacgtcatcctctcggccggaatccagctcccctccgtctgttaccacccccagcttgga
ccgattcagacgtgcgacacctgcatggtccaggtggacggaaagctggtcagggcctgc
gccgtcgaggtcggcgagggcatggaagtcgtaaccactacacccgcggcggccgctgcg
cggcgggaggcgttcgaccgcattctcggcaatcatctgctttattgcaccgtatgtgat
aataataacggcaattgcaccgtccacaacacgacgaaactgctggctgtcgagcatcag
aaaattccttttaagacgaaaccttttcaagtcgacaacacgaatcccttttatcgatac
gatcccgaccagtgcatcctttgcgggcggtgcgtcgaggcatgccaggatgtgcaagtg
aacgaaacgctctcgatccgatgggaagacgcgcatccccgcgttttgtgggacggcggc
tcgatgatcggcgagtcgagctgcgtctcttgcggccactgcgtcacggtctgcccgtgc
aacgccctgatggaaaagtccatgctcgggcatgccggctttttcacggatctgccgaaa
tcgacgctcgacggcatgatcgagatggtgaaggccgtcgaacccgaggcgggctacggc
gcgatcctcaaagcgtccgaggcggaggcggcgatgcgggagtcgcgcgtccgccgaacg
aaaaccgtctgcacgtattgcggagtcggttgcagcttcgacgtctggacgaaagatcga
catatcctgaaagtcgagccggaacagggaccgaccaacggaatctcgacgtgcgtcaaa
ggaaaattcgcctgggacttcgtcaacagccaggatcgcctgaccaagccgctcatccgc
gagggcgacgccttccgagaggcgagttgggatgaggccctgggattggtcgcccgccga
ctctcggagatcaaggcccaggacggtcccgacgccctggccttcatctcctcgtccaag
tgcacgaacgaggagagctatctgatgcagaagctggcgcgcgcggtcgtcggcacgaac
aacatcgacaactgctcgcgatactgccaggcgcccgcgacggtgggcttgttccggacc
gtcggctacggcggcgactcgggttcgatgaccgatatcgccaaggccgacctcgtcctg
atcgtcggcagcaacacggcggagagccaccccgtgctcgccacccgagtcaagcgggcc
cacaagcttcacggccagaagctcatcgtcgcggacatccgcgagcatgaaatggcgcgc
cgggccgacgtcttcctccggccccgtcccggcaccgatctcgtctggctgtccgcgatc
agccgctacctcctcgaccagggattggcgaagacggcgtttctcgaccggtgggtcaac
gggctggaggcctaccgcgcgagcctcgaacccttcacgctcgaagccgccgaacggtat
tgcggactggctgcggagaccttgaagaaggtcgctcacatgatcgcggacgcgcccgac
gtctgcatcctctgggcgatgggtgtgacgcagcactcgatgggctccgatacgtcgacg
gcgatctcgaacctgctgctcatcaccggcaattatatgcggccgggaacaggcgcttat
ccgttgcgcggacacaacaacgtgcaaggggccagcgaccacggcgccatgcccaacaat
cttccgggctatcagcacgtcgacgaccccgaagttcgggcgcggttcgaggccggatgg
ggcgtcaagctgccgaccaccaagggcctcgacaaccatgagatggttgacgcgattcaa
gacggcaggctcaaggcgctctacattttcggcgaggaaatgagcctggtcgacgccaac
accaactacgtccaggacgctttcgccaagctcgaattcttcgtcgtccaggacatcttc
ttcagcgagacgtgccgcttcgccgacgtcgtgcttcccgcggctccgagtctggagaag
gaggggaccttcaccagcacggagaggcggattcagcggctgtaccaggtgttcgacccc
ctcccggggagccggcccgactggcggatcattcgcgacgtggcgaaccacctcggtgcg
aactggagttatgaacatccttccgagatcatggacgaagtcgcgtcgctgaccccgctt
ttcgccggcgtctcctatggtcgactcgaaggctacaattcgctgcaatggcccgtcgcc
gccgacggcggcgatcaaccgctgctctacaccgagaagttcgcctttcccgacggcaag
gccaggctgtttcccctgtcctggaccgaaccggtcgatcaacccgacgaggaatacgac
ctgcacctgaacaacggccgcctgctcgaacacttccatgaggggaacctgacgtaccgc
gtcgagggaatccggcggaacacccccgacgtgttcgtcgaggtctctcccgagctggcc
caggagcgaggcgttcagagcggaacgcgcgtggaattgatctcgcgctacgggcatgtg
cggctgcgagccctggtgacggatcgcgtccacggaaagcagctttatatgccgatgaac
tcgacggaatcgcccgtgaatcggttgatcgggagccacaccgacgccgtgacgaacacc
cccgcctacaaggaagccgccgtgcgaatgcgggtgctgccggagctggacgagagcccg
atgcctcgggggaactttcgcttcggcaacccgacgccgcagcaaggcgtcgaggtcgaa
cggaaatggagtcggccggactattccattcccggaatccccttggttcagattcaactc
ggaccgaacaaggagtga
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