Paludisphaera borealis: BSF38_05015
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Entry
BSF38_05015 CDS
T04622
Symbol
sigW_14
Name
(GenBank) ECF RNA polymerase sigma factor SigW
KO
K01991
polysaccharide biosynthesis/export protein
Organism
pbor
Paludisphaera borealis
Pathway
pbor02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pbor00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BSF38_05015 (sigW_14)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbor02000
]
BSF38_05015 (sigW_14)
Transporters [BR:
pbor02000
]
Other transporters
Pores ion channels [TC:
1
]
BSF38_05015 (sigW_14)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
SLBB
Sigma70_r4
Poly_export
Sigma70_r2
SLBB_2
Sigma70_ECF
HTH_30
Motif
Other DBs
NCBI-ProteinID:
APW63448
UniProt:
A0A1U7CX25
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Position
complement(6469881..6471578)
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AA seq
565 aa
AA seq
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MAGGSPERLQRDLTTLFQVGTAAGLTDRELIARISRASADDAEALLEVLVTRHGPMVLRV
CRNVLNDPHDAEDAFQATFLVLVKQFRTIRKLDSIGSWLYGVAARVSARARVEAAKRRKR
EREHVQLAVVPALDDEASRGLAIQEEVLRLPDRYRSVVVLCYWESLTHEQAAARLACPIG
TVRSRVARARELLRRRLVHRGVADVDPAPAVLPLSSALVRSTVQAAAKVASGQSVSKVVA
ARVASLSLHVIRRMVMTKLGMIAVPTCLALVASIGLGLAAQTAKRADRDDKPRADRGASE
TKKLQPAPEVKEYVVEPPDVILVEVLEALPGRPISGERLVRPDGKITLGFYGEVYVAGLT
IKEIKEKVVLHLRRFLGDEVLGLDVEGKKTPPGDTDRVFVDVTTWNSKVYYVQGEVHDPG
RLPVTGKETILDAVDFAGGLTPQADHESVVLVRNDPKGGPPEKLHVDIDEVLLGDDASTN
YYLQAGDRLVVRRDPGIQGDHGDRPSAGRSKASSETKEADHPDVDTSNGPQRTPGLELKI
QALERRLIAIESQLRKVLEKLDQPR
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggccggtggttcgcccgagcggcttcagcgcgacctgacgaccctgttccaggtgggg
acggccgctggtctcaccgatcgggaactgatagcccggatctccagggcgtcggccgac
gacgcggaagcgttgttggaagtgctggtgacgcggcacggcccgatggtcctgcgcgtc
tgccgcaacgtcctgaacgacccgcacgacgccgaggacgccttccaggcgacgttcctg
gtgctcgtcaagcagttccggacgatccgcaagctcgactcgatcgggagctggctctac
ggcgtcgccgctcgggtttcggcccgggcgcgagtcgaggccgcgaagcggcggaagcgc
gagcgcgaacacgtgcaactggccgtggtccccgccctggacgacgaggcgtctcgcggc
ctcgcgatccaggaggaagtcctccgcctgcccgatcgctaccgatccgtcgtcgtcctc
tgctactgggagagcctgacccacgagcaagccgccgctcggctcgcctgcccgatcggg
acggtccgcagccgcgtggcgcgagcgcgcgaactgctccgccgtcggctcgtccaccga
ggcgtcgccgacgtcgatccggcgccggcggtccttcccctctcgtcggcgctcgttcga
agtaccgtccaggccgcggcgaaggttgcctccggccagtccgtctccaaggtcgtcgcg
gcgcgcgtcgcgagcctttcccttcacgtcataaggaggatggtaatgacgaagctcgga
atgattgcggttcccacctgcctggcgctggtggcgtcgatcggtctgggactcgcggcg
cagacggcgaagcgggccgaccgcgacgacaagcctcgggctgatcgcggtgcatcggag
acaaagaagcttcagcccgccccggaagtgaaggaatacgtcgtcgagccgcccgatgtg
atcctcgtcgaagtccttgaggcactgccgggtcgacccatttcaggcgagcggctggtg
cgtcctgacggcaagatcacgcttggtttttacggcgaagtttacgttgccggcttgacg
atcaaggagatcaaggaaaaagtcgtcctccacttgcggcgctttctgggggacgaggtt
ctcgggcttgatgttgaaggtaagaagactcccccgggcgataccgaccgcgtcttcgtc
gacgtcacaacatggaatagcaaggtctactacgttcaaggtgaggttcacgaccccggc
cgactgccggtgacggggaaggaaacgattctcgacgcggtggattttgctggggggctg
acgcctcaagcggatcatgaaagcgtcgtcctcgtgcgtaacgaccctaagggcgggccg
ccggagaagcttcacgtcgacatcgacgaggtcctgctcggcgacgacgcctcgaccaac
tattatctccaggccggcgaccgactggtcgttcgtcgcgaccctggaattcaaggcgac
catggcgatcgcccctccgcggggcgatccaaggcctcatctgagacgaaggaagccgat
caccccgatgttgatacgtcgaacggccctcagcggacgccggggctcgaactgaagatt
caagctctcgaacgccggctgatcgcgatcgagtcgcaattgcgcaaagtccttgagaag
ctcgatcagccgcgctga
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