Paludisphaera borealis: BSF38_05309
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Entry
BSF38_05309 CDS
T04622
Symbol
cshA_2
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pbor
Paludisphaera borealis
Pathway
pbor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSF38_05309 (cshA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbor03019
]
BSF38_05309 (cshA_2)
03009 Ribosome biogenesis [BR:
pbor03009
]
BSF38_05309 (cshA_2)
Enzymes [BR:
pbor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BSF38_05309 (cshA_2)
Messenger RNA biogenesis [BR:
pbor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BSF38_05309 (cshA_2)
Ribosome biogenesis [BR:
pbor03009
]
Prokaryotic type
rRNA helicases
BSF38_05309 (cshA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
APW63733
UniProt:
A0A1U7CXX0
LinkDB
All DBs
Position
complement(6848538..6849725)
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AA seq
395 aa
AA seq
DB search
MGLSPTMLKALTLARYRTPSPIQASLIPLALEGLDVIGQAKTGTGKTAAFGIPLIEMLEP
RGRGPQAIILAPTRELTQQIVIEIQKLAQTRGDVSICGLYGGEPIERQIRSLSRGVDIVV
GTPGRVLDHMERRTLYLGDIFHFVLDEADRMLDIGFRPDIERVFRKLPTPHQTMLLSATI
SAEVRKLAQRYMHKPEEVNLSRDEPSVDTIQQYYISVNHDRKLELLAYLLKRDQPRQCIV
FTRTKRGADRLAERLRRTIPGVAAIHGDLAQSARDRVMSGFRARTIQILVATDVVGRGID
VEGISHVVNYDIPDDPENYVHRIGRTGRMGKDGIAYLFVGPDQGEPLTLIETLINKVIPA
HKVDGFEVARAASSAPPARELFNTAVTRSSHLAIR
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggggctgagcccgacgatgctcaaagccctgacgctcgcaaggtatcgcaccccctcc
ccgatccaggcctcgctcattcccctcgcccttgaagggctggacgtcatcggccaggcc
aagaccggcaccggcaaaacggcggccttcggcattccgttgatcgagatgcttgagccg
cgcggacgaggtccgcaagcgatcatcctggcgcctacccgcgagttgacccagcagatc
gtcatcgaaatccagaagctcgcccagacccgcggcgacgtgtcgatctgcggcctctac
ggcggcgaaccgatcgagcggcaaatccgctcgctcagccgaggcgtcgacatcgtcgtc
ggcacgccgggccgggtgctcgaccatatggagcgccgcacgctgtatctcggcgacatt
ttccacttcgtcctcgacgaggccgaccggatgctcgacatcggcttccggcccgacatc
gagcgcgtctttcgcaagctgccgacgccgcaccaaaccatgttgctctcggccaccatc
agcgccgaggtccgcaagctggctcagcggtacatgcacaagccggaagaagtcaacctc
tcgcgggacgagccctcggtcgacacgatccagcagtattacatctcggtgaaccacgac
cgcaagctcgagcttctggcctacctgctgaagcgcgaccagccgcgtcagtgcatcgtc
ttcacgcggaccaagcggggggccgaccggctcgccgagcggctccggcggacgatcccc
ggcgtcgcggcgatccacggcgacctcgcgcagtcggcccgcgatcgggtcatgtcgggg
ttccgggcgcggaccatccagatcctggtcgcgaccgacgtcgtgggccggggcatcgac
gtcgaaggcatcagccacgtcgtcaactatgacatccccgacgatcccgagaactacgtc
caccgcatcggccgcaccggccggatgggcaaggacgggatcgcctacctgttcgtcggc
ccggatcagggcgagccgttgaccctcatcgagacgctcatcaacaaggtgatcccggcc
cacaaggtcgacggcttcgaagtggccagggccgcttcctccgccccccccgcccgcgag
ttgttcaacacggccgtcacgcggtcgtcgcatctcgccatccgctga
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integrated database retrieval system
