Paludisphaera borealis: BSF38_05619
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Entry
BSF38_05619 CDS
T04622
Symbol
metC
Name
(GenBank) Cystathionine beta-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
pbor
Paludisphaera borealis
Pathway
pbor00260
Glycine, serine and threonine metabolism
pbor00270
Cysteine and methionine metabolism
pbor00450
Selenocompound metabolism
pbor00670
One carbon pool by folate
pbor01100
Metabolic pathways
pbor01110
Biosynthesis of secondary metabolites
pbor01230
Biosynthesis of amino acids
Module
pbor_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
pbor00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BSF38_05619 (metC)
00270 Cysteine and methionine metabolism
BSF38_05619 (metC)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
BSF38_05619 (metC)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BSF38_05619 (metC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pbor04147
]
BSF38_05619 (metC)
Enzymes [BR:
pbor01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
BSF38_05619 (metC)
Exosome [BR:
pbor04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
BSF38_05619 (metC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Met_gamma_lyase
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
APW64030
UniProt:
A0A1U7CYK0
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All DBs
Position
7258133..7259302
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AA seq
389 aa
AA seq
DB search
MSTRTNYSWEFATRAIHTGQGADPATGATVTPIYATSTFTQHAPGEHKGYEYSRSGNPTR
TALETCLASLEEAEQALAFASGLAATTAVLSCYRPGDEVVAAADLYGGTYRLLERVFRPM
GVVPRYTEDGSPEGFAALMNSKTKLVWIESPTNPLLQILDVEAIAAVAHRHGAILAVDNT
FASPYLQQPLKLGADLVVHSTTKYIGGHSDVVGGAVMGSRTLLEPIKFYQNAAGGVPGPF
DCWLTLRGVKTLAVRMERHNANAQELASWLTTRPEVEKVYYPGLAGHPGHALASRQMKGF
GGMISLHLKGRAGAARRFLTGTRIFSLAESLGGVESLISHPATMTHASIPAEIRAARGVD
DGLVRLSVGIEDVRDLRADLQRALESLSA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagcacccgaaccaactactcgtgggaattcgcgacgcgggccatccacacgggccag
ggggccgaccccgccaccggcgcgaccgtgacgccgatctacgcgacctcgaccttcacc
cagcacgcgcccggcgagcacaagggctacgagtattcgcggagcggcaaccccacccgc
accgccctcgaaacctgcctggcgtcgcttgaggaggccgaacaggcgttggccttcgcc
tcgggactggccgcgacgaccgccgtgctctcgtgctaccgtccgggcgacgaggtcgtt
gccgcggccgacctctatggcggcacctaccgcctgctcgaacgcgtcttccgccccatg
ggcgtcgtcccgcgctacactgaggacggttcccccgaaggcttcgcggccctcatgaac
tcaaaaacgaagctcgtctggatcgagtcgccgaccaaccccctgctccagattctcgac
gtcgaggcgatcgcggccgtcgcacatcgccacggcgcgatcctggcggtcgacaacacc
ttcgcctcgccgtaccttcagcagccgctgaagctcggcgccgacctagtcgtccacagc
acgaccaagtacatcggcggccattccgacgtcgtgggcggggccgtcatggggtcgcgt
acgctcctcgaaccgatcaaattctatcagaacgcggccggcggcgtccccggcccgttc
gactgctggctgacgctgcgaggagtcaaaaccctcgccgtccgcatggaacggcacaac
gccaacgcccaggaattggcctcgtggctgacgacccggcccgaggtcgagaaggtctat
tacccgggtctggccgggcatccgggacacgcgctggcgagccgccagatgaagggcttc
ggcgggatgatcagccttcacttgaaggggcgcgcaggggcggccaggcggttcttgacc
ggcacgcggatattcagcctggccgagagcctgggcggcgtggagtcgctgatctcgcat
cccgcgacgatgacccacgcgagcatcccggccgagatccgcgccgcgcgcggggtcgac
gacggcctggtccggctgagcgtgggcatcgaagacgttcgcgacctgagagccgacctg
caacgcgccttggaatcgctttcggcgtga
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