Entry |
|
Symbol |
virA
|
Name |
(GenBank) Wide host range VirA protein
|
Organism |
pbp Sedimentisphaera salicampi
|
SSDB |
|
Motif |
|
Other DBs |
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LinkDB |
|
Position |
complement(59214..62228)
|
AA seq |
1004 aa
MNLKKSKYLILCWKLLFLVSAAGLIAGENGKSDFLNKTEKQWVEEHPVVKVAPDKNFAPI
EFVENGEIKGFSGEYLRIISEKTGLKFKITQTDNWAETFESAIEWQSDMLSSAAYTEDRK
ERLLFSRPYVTFPIGIYTQLGGPYITNLRELNGERVAVVNDYAVENWLRRDYPEIKIVET
GSVTDSFERLSEGKVEAVIEDFLVAKYNIAKHNFKGIKAAGATPYQYKICFGVRKDWPEL
RDIINKTLASLSKNETERINKKWAESAIIHHINIKRARFWLSVSAGLAAFIIALILVWNK
QLKSRVKQRTRELSAEKEKFKTILNSAGDAIYVHRKDGKLLLFNNQAMDDLGYTEKELAG
LNVKDIDNNLDEPVDVQKALEKTAYGKNFVFRTENIRKDGSIFPAEVRLGSFEIDGEKVF
LGISRNIEQRERQQREQEAMVELFRLVNCREKLSELIKEFLPYLRDWAKCDAAGIRLKRG
EDYPYYHTLGFSEDFVQTENSICLLNKKYCPIRGQVSEQKYACMCGLVVSGDTNRDTGNF
TKSGSFWTNSSSGLMEAMAESGFSENIRGRCCTEGFESIALIPLRDAGEIIGLLQLNTRA
KNNFDIETVRSLERTADSLACVISRYTALSSLRESNKRFKLIYEKTLLGYQCFDTYGIIR
EVNPAMLSITGCSREEMLGKEFSDFLDENSAKSFKRFLNSGKSEVRGLGLKLKSKTGEHL
FIEMDWSAEFSREYSIENYHAIIRDVTERKINEDRNRRLSEQLHQRQKLESLGTLAGGIA
HDFNNILTAIIGHAGLAKKNCGEDSRAYKNINQILQASDRAKKLVNQILTFSRSSDLQKT
SISVCSIIDECLSMIKPSVPENVRISKFIRTSRDTIRGNESQLLQIISNLITNSIHAVGE
KNGQIYVILEEAKLEEPLVTINGNLSPGTYIKLTVSDNGCGLDENTKEKIFEPFFTTKPV
NKGTGMGLSVVHGIISSLGGLITIDSQLGKGTDFNIYFPPAEEQ |
NT seq |
3015 nt +upstreamnt +downstreamnt
ttgaacttaaagaagtctaaatacttaatactatgctggaagctgctgtttcttgtttca
gccgccgggcttatagccggcgaaaacggcaaatccgactttttgaacaagacagaaaag
caatgggttgaagaacatcctgttgtaaaagtggccccagacaagaactttgcgccgata
gaatttgtggaaaacggtgaaattaaaggtttttcgggcgaatacctcaggattatctca
gaaaaaaccggcctaaaatttaaaatcacacaaacagacaactgggctgaaacatttgaa
agcgcaatagaatggcaatccgatatgttgagctctgctgcctatactgaagacagaaag
gagcgtctattattcagccgaccttatgtaacctttccaatcggtatttacacgcagctg
ggcgggccatacattacaaacttacgggagctaaacggagagagggttgctgttgtaaac
gattatgccgttgaaaattggctgagaagagactatcctgaaataaaaatcgtagaaaca
ggctctgttacagattccttcgagaggctcagcgaaggcaaagttgaagctgtaatagaa
gattttcttgtggccaaatacaatatagccaagcacaatttcaagggtattaaagctgcc
ggtgcaacgccctatcaatacaaaatctgtttcggagttcgcaaagactggcctgagctt
agagatataataaataaaaccctcgcctccctttcgaagaatgagacagagagaatcaat
aaaaaatgggcagagtctgccatcatccatcacatcaacataaagagagctcgattctgg
ctttcagtatctgcgggacttgcggcctttatcatagctctgattcttgtctggaacaaa
cagctcaaatcaagagttaaacagagaacccgtgaactctccgcagaaaaggagaaattc
aagacaatccttaacagcgctggagatgctatatatgtacacagaaaggatggaaagctg
cttttattcaacaatcaggcaatggatgatctaggatacacagaaaaagagcttgcaggg
ctcaatgttaaagatatagataacaatcttgacgaacccgtagatgtgcaaaaagcactc
gagaaaacagcttatggcaaaaattttgtatttagaacggaaaacataagaaaggacggg
agcatttttcccgcagaagttaggcttgggagctttgaaatcgatggtgaaaaggttttt
ctcgggatttcccgcaatattgaacagcgtgagaggcagcagcgtgagcaggaagcgatg
gtagagcttttcaggctggtaaactgcagggaaaagctcagcgagttaatcaaggaattt
ctgccctaccttagagattgggcaaaatgcgatgcagcaggaatcaggctcaaaagggga
gaggactatccatactaccatactttaggcttctctgaagattttgtgcaaactgaaaat
tctatctgcctgctgaataaaaaatactgcccaattagagggcaggtaagcgaacaaaaa
tacgcctgcatgtgcggattagttgtgagcggggatacaaaccgagatacaggaaacttt
acaaaatcggggagtttctggacgaactcttcaagcggccttatggaagctatggcggaa
agcggcttttctgaaaacataagaggaaggtgctgcactgaaggattcgaatccattgct
ctgattccgctcagagatgctggagagattatcgggcttttacagcttaacacaagggcc
aaaaacaactttgacattgaaactgtccgctctcttgaacggactgcagacagtcttgca
tgcgtaatttccagatacaccgccctttcctcacttcgggaaagcaataagcgttttaag
ctgatttacgaaaaaacgcttctgggctatcaatgttttgacacatacgggataatcaga
gaagttaaccctgccatgctgtcaatcaccggctgcagcagagaggagatgcttgggaag
gagttttcggatttcttagatgaaaactcagcaaaatcattcaaaagattcttaaattcc
ggcaaaagtgaagtgagagggcttgggcttaaactaaaatccaaaacaggagaacacctg
ttcatagagatggactggagcgctgaattctcccgagagtacagcatcgaaaattatcac
gcaattatcagagacgtaactgaaagaaagataaatgaagatagaaaccgcaggctctct
gaacagctccatcaaaggcagaaacttgaatccctgggcacactcgccggcggaatagcg
cacgatttcaacaatatattaaccgcaataatcggacatgccgggctggcaaagaaaaac
tgcggagaagactcccgtgcatacaaaaacatcaatcagatacttcaagcatctgacagg
gcgaaaaagctggtgaatcagatacttacattcagcagatcatcagacttgcagaaaaca
agcatctctgtttgttcgattatcgatgagtgcctgtcaatgattaagccctctgtgccg
gaaaatgtacggatttcaaagtttatcagaaccagcagagacacaatcagaggcaatgaa
tcccagctcctgcagattatttcaaacctgataacaaactcaatacacgctgtgggggaa
aagaacgggcaaatctatgtgatccttgaggaagccaagcttgaagagcctctggttact
ataaacgggaacctctcgcccggaacgtacataaagctcactgtaagcgataacggctgc
gggctggatgagaataccaaggaaaaaatattcgagcccttctttacaaccaaaccagta
aacaaaggtacgggaatggggctctcagtggttcacggaataataagcagcttaggcggg
ctgattaccatagactcgcaattgggcaaaggcaccgattttaatatatatttccctccg
gcagaagagcagtga |