Sedimentisphaera salicampi: STSP1_00191
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Entry
STSP1_00191 CDS
T05439
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pbp
Sedimentisphaera salicampi
Pathway
pbp03410
Base excision repair
pbp03430
Mismatch repair
pbp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
STSP1_00191 (recJ)
03430 Mismatch repair
STSP1_00191 (recJ)
03440 Homologous recombination
STSP1_00191 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbp03400
]
STSP1_00191 (recJ)
DNA repair and recombination proteins [BR:
pbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
STSP1_00191 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
STSP1_00191 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
STSP1_00191 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
ThiG
tRNA_anti-codon
Toprim
SLAM
SIS_2
Motif
Other DBs
NCBI-ProteinID:
ARN55825
UniProt:
A0A1W6LJ93
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All DBs
Position
265220..266965
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AA seq
581 aa
AA seq
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MKNKLSKIEKKWQVKDVDKEKIKDVCSQLGVTPAVAQVLINRNITEMEEAKKFLKPSLKD
LILPERFTQMEEAVEKIVETIKEGKKVFVYGDYDVDGITATSILCRFFDAVGAKYNFYIP
HRIEEGYGLNTAALDEIAQSGAALLITVDCGVCSSKEVDYAVQLGMDVVITDHHVPEEKL
PEAASAVIHPMLDDYPSPKSCGAMVAMKLAWALCEEYRGSGLSDKQCRDLLLISTDFASL
GTVADVMPLTGENRSLISYGLNSLRLSSLPGIRALMNAAGLSGKSLDTFDLSFRISPMLN
AAGRMGHARLAVELLTTDNDIRALRIAEYLKEQNNQRKKIEKRILKEASHLISATGLDHP
DRRSIIIAGEEWHLGIVGIVASRIIEKFYKPTILLNSDGKLSTGSARTIEGFNILNAINA
CSDHLVKFGGHSEAAGITIETENLPRFVEDFEEYAKENVSDDILVQKLEIEGWFGIKNFS
PKTFQQLEKIAPFGKGNPRPLFAARGIRLEGSPQKIGAAKEHLRFVIRDAGGRMPCVAFK
MASYYNKLLESDYFSVAFEPIFNEYNGEKRPQFVIRDFKFD
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataaactcagcaagatagagaaaaaatggcaggtcaaagacgttgacaaagag
aagataaaagatgtttgctcccagctcggtgtaactcctgcagtcgctcaggtgcttata
aaccgaaatattacggagatggaggaagcaaagaagtttctcaagccatccctgaaagat
ttaatccttcccgaacgctttacgcagatggaagaagcggtagagaagattgttgaaacg
ataaaggaaggtaaaaaggtctttgtttacggagattatgatgttgacgggatcacagct
acatcaattttatgccgcttctttgatgctgttggggctaaatacaacttttatattccc
cacaggatcgaagagggctacgggcttaatacagcagcattagacgaaatcgcccaaagc
ggcgctgcactgctaataactgttgactgcggcgtttgcagcagcaaagaggtggattat
gccgtccagctgggcatggatgtggtaataacagaccaccacgttcctgaagagaagctc
cccgaggctgcttccgctgtaatacaccctatgcttgatgactatcccagtcccaaatcc
tgcggggcgatggtggcgatgaagcttgcatgggcgctttgcgaggaatatcgaggcagc
ggcctgtcagacaagcagtgcagagatctcttgctaatctccacagatttcgcctctctg
ggcactgtggcagacgtgatgcctctcacgggcgagaacagatcgctaatcagctacggc
cttaattctctgcgtctctcgagccttcccgggattagggcgttgatgaacgctgccggc
ttgagcggcaaatcgctggacacctttgacctgagttttaggatttcgcccatgcttaat
gccgcagggaggatggggcatgccaggctcgctgtggaactgcttacaacagataacgat
atcagggcgctgaggatagcggagtatctcaaggagcagaacaatcaacgcaaaaagatt
gaaaagagaatcttaaaggaagcatcccacctcatctctgccacaggactcgaccatcca
gacaggcgaagcattatcatcgcaggggaagaatggcatcttgggattgtagggattgtt
gcctcaaggattatagagaagttttacaagccaactatactgctcaattcagatgggaaa
ttatcaaccggctcagcccgcacaatagaaggtttcaacatactgaatgccataaatgcc
tgctcagatcatcttgtgaaatttggcggtcattccgaggcagcgggcataacaatcgaa
acagaaaatctcccgcgatttgtggaagattttgaagagtatgccaaagagaacgtttct
gatgatatcctagtacaaaagcttgaaattgaaggctggttcggcattaagaacttcagc
cccaaaacttttcagcagctcgagaagattgcccctttcggcaagggcaatcccagaccg
ttatttgcagcaagggggattaggctcgaggggagcccgcagaaaataggggcagcaaaa
gagcaccttcgctttgtgataagggatgcgggaggcagaatgccctgtgttgcttttaag
atggcttcatattacaataaacttctcgaaagcgattatttttctgttgcattcgagccg
atttttaacgagtacaatggtgaaaagagacctcagtttgttattcgggatttcaaattt
gattga
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