Sedimentisphaera salicampi: STSP1_00252
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Entry
STSP1_00252 CDS
T05439
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pbp
Sedimentisphaera salicampi
Pathway
pbp00300
Lysine biosynthesis
pbp00470
D-Amino acid metabolism
pbp01100
Metabolic pathways
pbp01110
Biosynthesis of secondary metabolites
pbp01120
Microbial metabolism in diverse environments
pbp01230
Biosynthesis of amino acids
Module
pbp_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pbp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
STSP1_00252 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
STSP1_00252 (dapF)
Enzymes [BR:
pbp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
STSP1_00252 (dapF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ARN55885
UniProt:
A0A1W6LJF4
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All DBs
Position
complement(342547..343422)
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AA seq
291 aa
AA seq
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MKFTKMQGLGNDYVYINCFEETVENPAELARWVSDRNFGVGADGLILICPSQTADVRMRM
FNSDGSESEMCGNGIRCVAKYAFDHKLAEPGTSFSVPGQRPCPHSLNIETGSGILKVGII
PDEEGIAESVCVNMGRPVLSPDEIPVNFEGERVVDEPYEYSGAQLRMTCVSMGNPHAVFF
CDDLEGLELGKIGPFIETDPIFPRRTNVHFVKVNTPEEITMRTWERGSGITMACGTGACA
CLAASVLNGKSQRAVLCHLPGGDLELHWCEEDGNIYMTGAATEVYNGYLLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttactaagatgcagggcctcgggaacgattatgtctacataaactgctttgaa
gagacagtggagaacccggcagaattagcaagatgggtaagcgacagaaacttcggagtt
ggtgctgacggactgatcctgatatgcccctcgcagacggcagatgtgcgtatgcgaatg
ttcaattcagacgggagcgaatcagagatgtgcggaaacgggatccgctgcgtagccaag
tacgccttcgaccacaagcttgccgaacccgggacaagcttttctgttcccggccagcgt
ccctgcccgcattcactgaatattgaaaccggcagcggcatactgaaagttggtattatt
ccggatgaagagggtatcgctgaaagtgtatgcgttaatatgggaaggccagttctttcg
ccagatgaaatcccagtaaattttgaaggtgaaagggttgtagatgaaccctacgagtat
tccggcgcacagctccggatgacctgcgtttcgatgggcaacccgcatgcagtgttcttc
tgcgacgatctggaagggctggagctgggaaagatagggcctttcatagaaacagacccc
atattcccgagaagaaccaacgtgcattttgtaaaggtaaacacgcctgaggagataaca
atgagaacatgggaaagaggctccgggataaccatggcctgcggtacaggagcttgcgcg
tgtcttgctgcaagtgttctcaacggaaaaagtcagagggctgtgctctgccacctgccc
ggtggagacttagagcttcattggtgtgaagaggacgggaatatctatatgacaggcgct
gctactgaggtttacaacggctaccttctcggctga
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