Sedimentisphaera salicampi: STSP1_00436
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Entry
STSP1_00436 CDS
T05439
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pbp
Sedimentisphaera salicampi
Pathway
pbp03420
Nucleotide excision repair
pbp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
STSP1_00436 (pcrA)
03430 Mismatch repair
STSP1_00436 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbp03400
]
STSP1_00436 (pcrA)
Enzymes [BR:
pbp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STSP1_00436 (pcrA)
DNA repair and recombination proteins [BR:
pbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
STSP1_00436 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
STSP1_00436 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
PcrA_UvrD_tudor
ResIII
DEAD
nSTAND3
YBL028C_N
AAA_22
Imm5
GrpB
DUF5601
Motif
Other DBs
NCBI-ProteinID:
ARN56066
UniProt:
A0A1W6LJZ0
LinkDB
All DBs
Position
complement(575165..577345)
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AA seq
726 aa
AA seq
DB search
MSHSFSFDQLTQSQKEAIEHKDGPLLIIAGPGSGKTRTVTCRIARLVEKGVSPWSICAIT
FTNKAADEMKQRVREMGVPRGTQISTFHSLCVRILREFADYAGIKSTFSIYSDAEQKTCI
KEVIKASNQSTKNFPPAKILSYISNFKNDLFDPDEAHKMADNFQQKMVAKLYKRYQNRLV
QNNALDFDDLLTKTAFLIKNYPDIRKRLSERYKYILVDEYQDTNHAQYQIAKGLALEHGN
ICVTGDPDQSIYRWRGADIRNIMAFEKDWPNARVVKLEENFRSCPAVLNLADRLISHNRE
RKEKNLKAVRSEKKDIVFSPFEDQREEGLSIAGKINELIQQGHNPNEIAVLYRTNSMSRS
IEEAFIREKVPYLIVRGVEFYNRKEIRDMLAYLKLISNPSDSVALERIINTPARGIGKTT
MERIKSYASKKGISLWQAACEADKVELLSKTAAAKVLEFTKMIRGFQNFCGQDSFAVSDL
IEDIFESSGFKAALKKSSEQEDAVENIEELINNAAFFDAAQQEEGQLGGLDDYLQMISLY
SDADAYDPGSGKVSLMTLHAAKGLEFDNVFIIGLEEGILPHERSSESESQLEEERRLFFV
GITRARLNLFISQTKYRTIWGREIRTMPSKFIFECGLKTEKYSAVNDRIQESMRSSRKAE
REFAGKGKPSGSPAYFAGQRVSHRKFGAGVVKEYLDLGENSVITVKFDKGQIKTLIQKYA
KLECLD
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtcccactcattctcttttgaccagctaacccaatcacagaaagaagcaatagagcac
aaggatggccctcttctgataatagccggcccgggcagcgggaaaacccgtactgtaacc
tgccgcattgcaaggcttgtagagaagggcgtttcgccttggagcatctgcgctattaca
ttcaccaataaagcggctgatgagatgaagcagagggttcgcgagatgggcgtcccgaga
ggcacgcagataagcacgtttcactcactttgcgttaggattcttcgggagtttgccgat
tacgcgggcattaagagtactttcagcatttattcagatgccgagcagaaaacttgtatc
aaagaagtaatcaaggctagcaatcagtccacaaagaattttccgcctgccaaaatcctg
tcatatatttcaaacttcaaaaacgacctcttcgatcctgacgaagcccataaaatggca
gacaattttcagcagaagatggtggcaaaattatacaagcgataccagaaccgcctcgta
caaaacaacgcacttgattttgacgatctgctcactaaaactgcatttctcataaagaat
tatcccgatattcgaaagcgtctcagcgaaagatataaatatatcctcgtagatgagtat
caggatacaaaccacgcccagtatcaaatcgcaaaaggccttgctctcgagcatggcaat
atctgcgtaacaggcgatccagaccagtctatttatcgctggcggggagctgatataagg
aatattatggccttcgaaaaagactggccaaatgccagagtagtaaagctggaggagaat
ttccggtcttgcccggcagtccttaaccttgcagacaggctcatatcgcacaacagggaa
aggaaagagaaaaatctcaaggccgtccgcagtgagaagaaggatattgttttctcgccc
tttgaagaccagcgggaagagggactctcaatagccgggaagattaacgagcttatccag
caggggcacaatcccaatgaaatcgccgttctgtacagaaccaattctatgagccgctca
atcgaagaggcattcatacgtgagaaagtgccctatcttattgttcggggagtagagttt
tacaacagaaaagaaattcgtgatatgcttgcatatctcaagcttatttctaacccctct
gactctgttgcacttgaacggataataaatacgccagcgaggggcataggcaaaactaca
atggaaaggatcaagagttatgcctcgaagaagggaatctccctttggcaggccgcctgt
gaggcagacaaggtggagcttttaagcaagactgcggcggcaaaggttttagaatttacg
aagatgataagaggctttcagaatttttgtgggcaggatagctttgcagtttcagattta
atagaagatatattcgaatcctcgggttttaaagccgcccttaaaaaatcctcagagcag
gaggatgctgttgaaaatatagaggagctcataaacaacgccgcatttttcgatgctgct
cagcaggaggaaggacagctcggcggcctcgatgactatcttcagatgatctcgctatac
agcgatgcggatgcttacgacccgggaagcggaaaggtttctcttatgactctccacgcc
gctaagggcttggagtttgacaacgtatttataattgggctcgaagagggcatacttccc
catgagagaagcagtgagtcagaatctcagctcgaggaagagcgaaggctgtttttcgtt
gggatcactcgggcaaggctaaatctctttataagtcagacgaaatatcgaactatatgg
ggcagggaaataagaactatgccttcaaagtttatctttgaatgcggtcttaaaaccgaa
aaatattctgctgtaaacgatagaattcaagaaagcatgcggagctcccggaaagctgaa
agagaatttgcaggcaaaggcaaaccttctggaagccctgcatactttgccggccagagg
gtgagccacaggaaattcggcgctggtgtggttaaagaatacctcgatttgggcgaaaac
agcgtgattaccgttaaattcgataaggggcagattaaaaccctaattcaaaaatatgcc
aagcttgaatgtttggattag
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