Sedimentisphaera salicampi: STSP1_00484
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Entry
STSP1_00484 CDS
T05439
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
pbp
Sedimentisphaera salicampi
Pathway
pbp00541
Biosynthesis of various nucleotide sugars
pbp01100
Metabolic pathways
pbp01250
Biosynthesis of nucleotide sugars
Module
pbp_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pbp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
STSP1_00484 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pbp01005
]
STSP1_00484 (kdsA)
Enzymes [BR:
pbp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
STSP1_00484 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
pbp01005
]
Lipid A
STSP1_00484 (kdsA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NOD
Motif
Other DBs
NCBI-ProteinID:
ARN56113
UniProt:
A0A1W6LK44
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Position
complement(635625..636452)
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AA seq
275 aa
AA seq
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MSSFSIDGIRIGSQEDLFVFAGPCVIESRDLCFEVAEFLRELSDRLKTGIVFKASFDKAN
RSSINSFRGPGIDEGLRILQEVKQEFQLPVVTDIHLPSQAATVSEVADCLQIPAFLCRQT
DLLAAAAETGAAVNVKKGQFLSPWEMKNVVCKLRESGCEKVLLCERGTFFGYNRLVNDMT
AIGEMKNLGCPVIFDATHSTQQPGGLGTSSAGARESAPVLAASAAAAGADGMFFEIHPNP
EDALCDSACMMRMNDFEKTIKRCREIFKIVRQNDE
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagtttcagcatagacggcatccgcatcggttctcaggaggatttattcgttttc
gctggcccctgtgttatcgaaagcagggatttgtgttttgaagttgctgaatttcttaga
gaactctccgatagactcaagacagggatagttttcaaggccagcttcgataaggcaaac
cgttcaagcataaacagcttcagaggcccgggcatagatgaaggccttaggattcttcag
gaggttaagcaggagtttcagcttcctgtagttactgacatccacctgccatcgcaggcc
gccacggttagcgaagttgcagactgcctccagatacccgcattcttatgcaggcagaca
gacctgctcgcagcagcagctgaaacaggggcggcagtcaatgttaagaaggggcagttt
ttgagcccttgggaaatgaaaaatgttgtctgcaagctcagagaatcgggctgcgagaag
gttctcctctgcgaaagaggcacatttttcggttacaaccgcctcgtaaatgatatgaca
gccataggcgagatgaaaaatctcggctgccctgtgatatttgatgccacccacagcacc
cagcagccaggaggtttgggcacgtcaagcgcaggtgcaagggagagcgccccagttctt
gctgcctctgctgcagccgcaggcgcagacggaatgttctttgagatacacccaaacccc
gaagatgctctttgtgattctgcatgtatgatgaggatgaacgattttgagaagaccatc
aaaaggtgccgggaaattttcaaaatagtcaggcagaatgatgagtga
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