Sedimentisphaera salicampi: STSP1_00677
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Entry
STSP1_00677 CDS
T05439
Symbol
rfbB_1
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pbp
Sedimentisphaera salicampi
Pathway
pbp00521
Streptomycin biosynthesis
pbp00523
Polyketide sugar unit biosynthesis
pbp00525
Acarbose and validamycin biosynthesis
pbp00541
Biosynthesis of various nucleotide sugars
pbp01100
Metabolic pathways
pbp01110
Biosynthesis of secondary metabolites
pbp01250
Biosynthesis of nucleotide sugars
Module
pbp_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pbp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
STSP1_00677 (rfbB_1)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
STSP1_00677 (rfbB_1)
01055 Biosynthesis of vancomycin group antibiotics
STSP1_00677 (rfbB_1)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
STSP1_00677 (rfbB_1)
00525 Acarbose and validamycin biosynthesis
STSP1_00677 (rfbB_1)
Enzymes [BR:
pbp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
STSP1_00677 (rfbB_1)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
Gp_dh_N
Motif
Other DBs
NCBI-ProteinID:
ARN56301
UniProt:
A0A1W6LKJ4
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Position
complement(925826..926869)
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AA seq
347 aa
AA seq
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MNIIVTGGAGFIGSAVIRHIIKNADHSVLNIDKLTYAGNLSSLKEVEGSDRYSFAQADIC
DKPAVQELFSSFKPDAVMHLAAESHVDRSIDGPADFIETNIIGTYNLLDISKKYFEQLQP
DAKSRFRFHHISTDEVYGSLGREGFFKEETSYDPRSPYSASKASSDHLVKAWHHTYQLPI
VLTNCSNNYGPYQFPEKLIPLIILNALEGKPLPVYGKGDNIRDWLYVEDHAEALAKVLLE
GRPGESYNIGGHNEKTNLEVVQTICDLIDEIRPADKPRRELIKFVKDRPGHDKRYAIDAG
KIQSELGWQPKESFETGIRKTIQWYIDNQWWWQPIRDSKYAGERLGE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaacataatagtaacaggtggtgcgggctttataggctcggccgtaataagacatatt
ataaaaaacgccgaccatagcgtgctcaatatcgacaagctcacttacgcgggtaatctt
tcctcgctcaaggaggttgagggttcggatcgctatagctttgctcaggctgatatatgt
gataagccggccgtgcaggagcttttcagctctttcaagcctgatgctgttatgcattta
gctgccgagtctcacgttgaccgctcaatagacggaccggcagatttcattgaaacaaat
ataattggcacatacaacctgctcgatatatccaaaaagtactttgagcagctccagccc
gatgctaagagtcgtttccgttttcatcatatctcaacagatgaggtttacggcagcctt
ggcagagaagggtttttcaaagaagaaacttcttacgaccctcgctctccttattcagcc
agcaaggccagctcagatcatctggttaaagcttggcatcatacttatcagcttccgata
gtgctcacaaactgctccaacaattacggcccatatcagttcccggaaaagcttatcccg
cttataattttgaacgcacttgagggcaagcccctccctgtttacggcaagggtgataat
attcgggactggctttacgtggaagaccatgctgaggctcttgcgaaggtgcttcttgag
ggcaggccgggagaatcctacaatatcggagggcacaacgaaaaaacaaacctcgaggta
gtgcagacaatctgcgatctcattgatgagataaggccggcagataaaccaagacgtgag
cttataaaattcgttaaagaccgcccgggccacgataaacgatacgcaatcgatgcgggc
aaaatacagagcgagctgggctggcagcccaaggaaagcttcgaaaccggcatcagaaaa
acaatacagtggtatatcgataaccagtggtggtggcagccgatcagagattccaaatat
gcaggagaaagactgggggaataa
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