Sedimentisphaera salicampi: STSP1_00835
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Entry
STSP1_00835 CDS
T05439
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pbp
Sedimentisphaera salicampi
Brite
KEGG Orthology (KO) [BR:
pbp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbp03032
]
STSP1_00835 (gyrB)
03400 DNA repair and recombination proteins [BR:
pbp03400
]
STSP1_00835 (gyrB)
Enzymes [BR:
pbp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
STSP1_00835 (gyrB)
DNA replication proteins [BR:
pbp03032
]
Prokaryotic type
DNA Topoisomerases
STSP1_00835 (gyrB)
DNA repair and recombination proteins [BR:
pbp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
STSP1_00835 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
HEPN_Swt1
Motif
Other DBs
NCBI-ProteinID:
ARN56453
UniProt:
A0A1W6LL19
LinkDB
All DBs
Position
complement(1130423..1132924)
Genome browser
AA seq
833 aa
AA seq
DB search
MSDKDSVKYNSANNNYDANSIKVLEGLEAVRKRPDMYIGNRGKGGLHHLVYEVLDNSIDE
ALAGRCDKITIKINLDGSCSVEDNGSGIPTEYHEDSGCSALELVLTTLHAGGKFDNNAYK
VSGGLHGVGVSVVNALSDVLIADVYRKGRHYRFECRKGEAKGGIEDLGKTSLQGTKITFL
PDHEIFGETDFNFETLQKRIRELAYLNAGVRLHFEDEREGKKEVFHFDQGLVQFVHHLNE
GKEPVHDDVILISKEDEESGLSCEIAMQYNNSYNENVLAFANNICNIDGGTHLSGFKTAL
TRTMNYYGKAAKLFKNGEITTSGEDLREGLTAVVSVKVPDPHFEAQTKVRLSNPEVGSFV
ETVMNNQLSEYLEENPAIAKKILTKAIQAAAARDAARKARELTRRKGALSSGNLPGKLWD
CSSKDARSTELFIVEGDSAGGSAKGGRDRTIQAILPIKGKILNVEKARLEKMLAHEEIRT
IVSALGTGIGADDFDISKSRYGKIVLMTDADIDGAHIRTLLLTFFFRQMPELFENDMIYI
AQPPLYEVREKGKKDSRFILSDAEMKKMLTDRGLGDTSIEVSEQSGQKVIPSGEVEKLVK
RVADLERLIGIIERRGIIFSDFVEQQYKEGALPVYRIIFDGSSEYFHDQSKFESRYSELN
SFSKEQNSFPEEGSQESEFSVPELEHSLTSEELTEVRRLNDINEEMMQNWGLSITDLLLK
EERTVAGELKPMKFRIVHGQESFSAASLIETAAEIREFGSRGIEIKRFKGLGEMNADQLW
ETTMDPENRAMLRVNIEDAAEADRLFSILMGEDVEKRRGFITEHALEVQNLDV
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaagattcagttaaatataattcagctaacaacaattatgatgccaacagc
ataaaggttcttgaaggccttgaggctgttaggaaaagaccggatatgtacatcggcaac
cgcgggaaaggtgggctccatcatctcgtttatgaggttctggataattcgatcgacgag
gctctggcgggcagatgcgataaaataacaatcaagataaatctcgacggaagctgcagt
gttgaggataacggctcgggcatcccgacagaatatcacgaggattccggctgcagcgct
cttgagcttgtgcttacaactctccacgcaggcggtaaatttgacaacaatgcctacaag
gtctcaggcggcctgcacggggtaggtgtgtctgtggtgaatgccttgagcgatgtgctt
attgcagatgtttacagaaagggcaggcactaccgttttgaatgccgcaaaggcgaggcg
aagggaggcattgaagacctcggaaaaaccagccttcagggtactaagattactttcctg
cccgaccatgagattttcggcgaaacagatttcaactttgaaacgcttcagaagagaatc
agggagcttgcatacttaaatgccggagtgaggctgcattttgaggatgagcgcgaaggc
aagaaggaagttttccatttcgatcaggggcttgttcagttcgttcatcatctcaatgaa
ggaaaggagcctgttcatgatgatgtgattctgatctccaaggaagacgaggaaagcggg
ctttcctgcgagatcgcaatgcagtacaacaacagctacaacgaaaacgtgctggccttt
gccaacaatatatgcaatatagatggcggaacacacctttcaggcttcaagacagccctt
acccgaacaatgaactattacggcaaagccgccaagctattcaaaaacggtgaaatcacc
acctcaggcgaagacctcagggaaggccttacggctgttgtgtctgtgaaagtgcccgat
ccgcatttcgaagcccagacaaaggttcgtttgtccaatccggaagtaggcagttttgtt
gaaactgttatgaacaatcagctttccgaataccttgaagagaatcctgcaattgcgaaa
aaaatactcacaaaagccattcaggcagcagcagctcgagatgctgcaagaaaggcaaga
gagcttacaagaagaaaaggtgctctcagcagcgggaatctgcccggcaagctctgggac
tgcagcagcaaagacgcccgttcaacggaactgtttatcgtagagggtgattctgcaggc
gggtctgccaaaggcgggcgagacaggacgattcaggctattcttccgataaagggtaag
atcctgaacgtggaaaaggcaaggcttgagaagatgctcgctcacgaggaaataagaact
atcgtaagcgccctcggaacgggcatcggtgcagacgatttcgatatatcaaaatccaga
tacggcaagattgtgcttatgacagacgccgatatcgacggagcccatatcagaaccctg
cttttaacgttcttcttccgtcagatgcccgagctgttcgagaatgatatgatttatatt
gcccagcccccgctatatgaggtgcgtgagaagggcaaaaaggacagccgttttattctc
agtgatgcggaaatgaagaaaatgcttaccgaccgcggcctcggggataccagtattgaa
gtttccgagcagagcgggcaaaaggtgattccaagcggcgaagtggaaaaacttgttaag
agagtggccgatttagaaaggcttatcggaatcattgaacgcagagggattattttcagc
gatttcgttgaacagcagtataaagaaggagctcttccagtttacagaataatatttgat
gggagcagtgaatacttccacgatcagagtaagtttgaaagcaggtattcagagctcaat
tctttctccaaagagcaaaacagcttccctgaagagggctcgcaggaaagcgaattcagc
gtgcctgagcttgagcactccctcaccagcgaagagcttactgaggttagaaggctaaac
gatataaacgaagagatgatgcagaattgggggctttcaattaccgatctgcttctgaag
gaagagagaactgtagcaggcgagcttaagcctatgaaattccgcattgtccacggacag
gaatccttctctgccgcctcacttatcgagactgccgctgagattagagaattcggaagc
aggggcattgaaataaagaggttcaaagggcttggcgaaatgaatgctgaccagctctgg
gaaaccacgatggatcctgaaaacagggcgatgcttcgggtgaatattgaagacgccgcc
gaggcagacaggctcttcagcatccttatgggtgaggacgttgaaaagagaagaggcttt
attactgaacacgcgcttgaagtccaaaacttggatgtttaa
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