Sedimentisphaera salicampi: STSP1_00880
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Entry
STSP1_00880 CDS
T05439
Symbol
priA
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pbp
Sedimentisphaera salicampi
Pathway
pbp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
STSP1_00880 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbp03400
]
STSP1_00880 (priA)
Enzymes [BR:
pbp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STSP1_00880 (priA)
DNA repair and recombination proteins [BR:
pbp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
STSP1_00880 (priA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
PriA_C
Zn_ribbon_PriA
DZR
zf-C3HC4_3
AAA_16
SLFN-g3_helicase
Ferritin_C144_05
AAA_30
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
ARN56498
UniProt:
A0A1W6LL23
LinkDB
All DBs
Position
1185859..1188174
Genome browser
AA seq
771 aa
AA seq
DB search
MSENNTLFDFSEQSRQEALAAEVVFDHNLDRSFSYIVPEELGAIQPGQRVSAPFGKGNKK
LTGFCISTEKTSNTKGLKRLSKIIDSSPLLAHPLIELAQWLSLYYVCPLGQVLSAMLPAG
VKKGLGFVQKRFIKLNCDNIHEAEEIQKKLKEGSKQKRLVTILTINNAFISGGGIESSEL
IKEAETTSQTLKKLLDAGAAVCERKAVLKGSHELAAVEEPDITLNSSQEESIGQINQKID
QSAFGVFVLHGVTGSGKTEVYIRALAKAAEKGKKGIILLPEIALTSQTILRFKKRFKRLA
VLHSGLTEAQRASQWHKIKLGKADVVIGARSAVFAPCDKLGVIIVDEEHESSYKQDTAPR
YNARDTAIKRAQIENAACILGSATPSFESYFNCKAKKHFKLLKLPERVEKRPMPQMQEVD
MSGRRAFMSEFMIGEKLKEDIENSLSSGEQAILLLNRRGYSNFIYCPECAHTIHCRNCDA
SLKFHLSDMLNENSSEKLYNTSGLALCHYCGSRTLVPKNCPVCGRQLTMRGSGSQKLEME
LNEKFPKAKIARIDTDSMKGKDYRELIEAFSKHEYDILAGTQMLAKGLHFPNVTLVGIVN
ADTSANSSDFRSAEKTFQLISQVAGRTGRGSKPGKVIIQTTAPDSPAVKFAKMHDYEGFY
KNQTPMRDMLGLPPFRKQALVQIRNEKKTRAEEDAAKACETLSSLIKTAQLDIRLKGPFE
PPIGRIGREFRVNILLNAANPAVMMSFLSKARFSELSRLSSKLFFDIDPLF
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagaacaacacactttttgatttctcagagcagagccggcaagaagcgcttgcc
gctgaggtagtgtttgatcacaatctcgaccgctccttcagctatatcgttcctgaggag
cttggggcaattcagcccggtcagcgagtaagtgcccccttcggaaaaggcaataaaaaa
ctcacaggcttctgcatcagcacagaaaaaacttcaaacacgaaggggctaaaaaggctc
agcaaaataatcgacagctcccccctgcttgctcacccgcttatagaactcgcacagtgg
cttagcttatactacgtgtgccctttggggcaggtgctctcagcaatgctgccggcaggt
gttaagaaggggctgggcttcgttcaaaaacgctttataaagctaaactgcgataatatt
cacgaagccgaagaaatccaaaaaaaactgaaagaagggtctaagcagaaacgtttagta
acgattttgacaattaacaacgcctttatttccggcggcggaatagaaagttcagagctg
ataaaggaggcagaaacaacctcgcaaactctgaaaaagctcttagatgcaggggcagcg
gtatgcgagaggaaggcagttttgaaaggctctcacgagctggctgctgtggaagagccg
gatatcacgctcaacagctcgcaggaagaatcgatcggtcagatcaatcaaaagattgat
caatctgccttcggagtgtttgtgcttcacggagtaacaggcagcgggaaaactgaggtt
tacatcagggctcttgcaaaagcagcggaaaagggcaagaagggaattatcctcctgcct
gaaatcgccctaacaagccagactattctgagattcaagaagaggttcaagcggctcgct
gtcctgcattcagggctcaccgaggctcagagggcaagtcagtggcacaagataaagctt
ggcaaagcggatgttgttatcggggcgaggtctgctgtttttgcgccctgtgataagctc
ggagtgattatagttgacgaggagcacgaatcttcgtacaagcaggacaccgccccgcgg
tacaatgcacgtgatactgcgataaagcgggcacagatagaaaatgcagcctgcatactc
ggctctgctacgccctcgtttgaatcgtacttcaactgcaaagccaaaaagcatttcaaa
cttctcaaactcccggagagggttgagaaaaggcctatgccgcagatgcaggaagttgat
atgtccggcaggcgagcttttatgtctgagtttatgattggcgagaagctcaaagaggat
attgaaaattccctgtcctcgggcgagcaggcaattctgctcttaaaccgcaggggatac
agcaatttcatatactgccctgaatgcgcacacacaatccactgcagaaactgcgatgca
agcctgaaatttcacctgtcagatatgctcaatgagaacagctctgaaaaactctacaac
accagcggtcttgcattatgtcattactgcggcagcagaacactcgtaccgaagaactgc
cctgtttgcggcaggcagctgacaatgcgcggctcgggctcgcaaaagcttgagatggag
ctgaatgaaaaattcccaaaagccaaaattgcaagaatagataccgattctatgaaaggc
aaagactacagagaacttattgaggcattttccaaacacgagtacgacatcctcgcaggc
acacagatgttagccaaggggctgcactttccaaacgttacgcttgtgggtattgtaaac
gcagacacttcggcaaactcatcggatttccgctccgccgagaaaaccttccagcttata
agtcaggtagcaggcagaacaggaagaggcagcaagcccgggaaggtaatcatccaaacc
actgcaccggacagcccggcagtgaaattcgcaaaaatgcacgattacgaaggcttttac
aaaaatcagacccctatgagggatatgctcggtctgcctcctttcagaaaacaggccctc
gtgcagattcgaaacgaaaaaaagacaagagcggaggaagatgccgcaaaggcctgcgag
acgctcagctcgcttatcaaaactgctcagctcgacataaggctcaaaggccctttcgag
cccccaataggcagaatcggccgagaattcagggtaaacatactgcttaacgcagcaaac
cccgctgttatgatgagctttttgagcaaagccagattttcagagctcagcaggcttagc
tctaaactttttttcgacatagacccgcttttctga
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