KEGG   Sedimentisphaera salicampi: STSP1_01089
Entry
STSP1_01089       CDS       T05439                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
pbp  Sedimentisphaera salicampi
Brite
KEGG Orthology (KO) [BR:pbp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pbp03016]
    STSP1_01089
Enzymes [BR:pbp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     STSP1_01089
Transfer RNA biogenesis [BR:pbp03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    STSP1_01089
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS 2H-SAK
Other DBs
NCBI-ProteinID: ARN56700
UniProt: A0A1W6LLM5
LinkDB
Position
complement(1466454..1467026)
AA seq 190 aa
MRTFVAVVPYPEVLDKIDRVQKRIAPELGHFRRDIKWVKPEDAHITLAFLGEVADNNLQS
VCDIVRNSVTGRADFTMSLRGTGTFGKNAHTFWAGVTKGAEELKALREAVCRPLAEKGFF
SPSKRFEPHITLARIKSPRPARIIKSIDRSLKKQSFGSCPVESVCVFTSELTKKGPEYTL
AAQYFFAGPQ
NT seq 573 nt   +upstreamnt  +downstreamnt
atgagaactttcgttgctgttgtgccttaccctgaggtcctcgataagatagacagggtg
cagaagagaatcgctcctgagctgggacatttccgcagggatataaaatgggttaagcct
gaagacgcccatatcactctcgctttccttggagaggtggcagataacaacctccagagt
gtttgcgatatcgttagaaacagcgtaaccggcagggcggatttcacgatgtcccttcgg
ggcacgggaacattcgggaaaaatgcccatactttctgggcaggcgtaaccaagggagct
gaagagctcaaggctctgcgggaagcggtttgcagaccgctcgctgagaagggctttttc
agtccgtcgaaaagattcgagccgcatataactcttgcaagaattaaatcgcctcgtcct
gcgagaatcatcaaaagcatagatcgctccctgaagaagcagtctttcgggagctgtccg
gtggaaagcgtatgcgtatttacaagcgagctgacaaaaaaagggccagaatataccctc
gctgctcagtacttctttgcaggcccgcagtaa

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