Sedimentisphaera salicampi: STSP1_01610
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Entry
STSP1_01610 CDS
T05439
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pbp
Sedimentisphaera salicampi
Brite
KEGG Orthology (KO) [BR:
pbp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbp03032
]
STSP1_01610 (topA)
03400 DNA repair and recombination proteins [BR:
pbp03400
]
STSP1_01610 (topA)
Enzymes [BR:
pbp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
STSP1_01610 (topA)
DNA replication proteins [BR:
pbp03032
]
Prokaryotic type
DNA Topoisomerases
STSP1_01610 (topA)
DNA repair and recombination proteins [BR:
pbp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
STSP1_01610 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HVO_2753_ZBP
DUF7573
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ARN57212
UniProt:
A0A1W6LN90
LinkDB
All DBs
Position
complement(2154636..2157095)
Genome browser
AA seq
819 aa
AA seq
DB search
MKNLVIVESPAKAKTINKYLGSEFEVKASNGHIRDLPSKGINVDIENGFQPTYDITPGKK
KLVGQLRSAAKKCDNVYLATDLDREGEAIAWHLAKVLGVSDEHTYRVVFNAITKNSIRQA
FADPGKLDMAKVNAQQARRILDRIVGYQISPLLWKKVAGGLSAGRVQSVAVKIVAEREKE
IRAFNPEEYWLIPAVFTTDLDQTSNGQHKYAESWEQLNAGEKKPSRAELADWFEQHNAFK
AELARVGGKKFGAKNQQQAEEIFHSLSGQDFTVSSVEKKESKSRPLPPFITSTLQQAASN
RSGFGAKRTMRIAQSLYEGVDLGGLGTIGLITYMRTDSTYLSPEALNAGRKYISEQLGAD
YLPDKPNFYASSKAAQEAHEAIRPTDPSITPQQARPHLSDEQFRLYDLIWRRFIASQMTP
AKWFITSVKVCAQAEVGECEFRASGRMLAFDGFTKIWQNRSTEQQLPEMREGQKLAAADL
RPEQHFTKPPARYTEASLVKALEKEGIGRPSTYASIISTIQDRKYVEQIDKKLRATDLGI
VVTEKLEDFFPEIMDIAFTRQMEENLDGIEEKNNDWVRVLEEFYGPFSSRLEQAKEQMKH
AKAETTPSDYNCPDCGAKLEYRFGKNGRFLSCSKYPECKYACPCDSEGKPVKEEKSGHKC
PNCGKDMVVKTGRYGKFLGCEDYPKCKTIMKIDKEGNVLPPAPPPEPTGIRCQKCKNGEL
VVRQSKRGPFLGCNKFPRCRNIISIKMLDRLKELQNEGVWPPDTIEEADEILGRKKTAAK
KKTAKKTTKKTTKKSTKKTAKKTAKKTTKKTSAKKKTSE
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcttgtgatagttgagtcgccggcgaaggcgaaaacgataaataaatatctc
ggctcggagtttgaggttaaggcctcaaacgggcacatccgcgacctgcccagcaaaggg
ataaatgtggacatagaaaacggcttccagccgacctacgatataactccgggcaagaag
aagctcgtcggccagctcagaagcgctgcgaagaaatgcgataatgtgtatcttgccaca
gacctcgaccgcgagggtgaggcgattgcatggcatctggccaaggttttgggcgtttcg
gatgaacatacataccgcgttgttttcaatgcgataacgaaaaattccatcaggcaggcc
ttcgcagatccgggtaagctggatatggcgaaagttaatgcccagcaggcaaggcgaatt
ctcgacaggatcgtgggctatcagataagccctctgctctggaagaaggttgccgggggc
ttgagtgctgggcgcgttcagtctgtggcggtgaagatagtagccgagcgggagaaggag
atccgtgcgttcaatccggaggaatactggctgattcccgcagttttcaccacagattta
gaccagaccagcaacgggcagcataaatacgccgagagctgggagcagctgaatgccggc
gagaagaagcccagccgcgctgagcttgcagactggttcgagcagcacaacgccttcaag
gccgagcttgcccgagttggcgggaagaaattcggagcgaaaaaccagcagcaggccgaa
gagatatttcactctctcagcgggcaggatttcacagtcagcagcgttgagaagaaggaa
tccaaatcacgccccctgcctccgtttatcacatccacgcttcagcaggccgcttcaaac
cgcagcggcttcggtgcaaaacgcacgatgcgtatagcccagagcctgtacgagggcgtt
gacctcggcggacttggaacaatcggcctgatcacctacatgcgtacagacagcacatac
ctctcgcccgaggcgctcaatgcagggcgaaagtatatcagcgagcagctcggggctgat
tatctgcccgataagccgaatttctacgcctccagcaaggccgcccaagaggcgcacgag
gcaatacgcccaacagacccgtcaataaccccgcagcaggcaaggccgcacttgagcgac
gagcagtttaggctctacgaccttatctggcggagatttatcgcctcacagatgacgccc
gcaaagtggttcattacgtctgtaaaggtatgcgcgcaggcggaggttggcgagtgtgaa
ttcagggcttccggaaggatgctcgcattcgacgggttcacgaagatttggcaaaaccgt
tccacagagcagcagcttcccgagatgagagagggccagaagctcgcagcggctgatcta
aggcccgagcagcacttcacaaagccgcctgcaagatacaccgaggcctcgcttgtgaag
gctttggagaaggaaggcatcggccggccgagtacgtatgcatcgatcatctccaccata
caggacaggaaatacgtggagcagatagacaagaagctccgcgccaccgacctcgggatt
gtggtaacagagaagctcgaagacttcttcccggagattatggacatcgcattcacccgt
cagatggaggaaaacctcgacggaatcgaagagaaaaacaacgactgggtgagggtgctg
gaggagttttacgggcctttcagcagccggcttgagcaggcgaaggaacagatgaaacac
gccaaggccgaaaccacccccagcgattacaactgccccgattgcggggcgaagctcgaa
taccgcttcgggaagaacggcagattccttagctgttcgaagtatccggagtgtaaatat
gcctgtccgtgcgactctgagggcaagcctgtgaaggaggaaaagagcggacacaaatgc
ccgaactgcggcaaggatatggttgtgaaaaccggacgctacggcaagttcctcggctgc
gaggactacccgaaatgtaaaacgattatgaagattgataaggaaggcaacgtgcttccg
cccgccccgccgccggagccgacggggatcagatgccagaagtgcaagaacggcgagctt
gtggtgcggcagagcaaacgcgggccgttcctcgggtgcaacaagtttccaaggtgccgg
aatataatcagcatcaagatgcttgataggctcaaagagcttcagaacgagggcgtttgg
ccgcctgatacaatcgaagaggctgatgagatcctcggcaggaagaaaaccgccgcaaag
aaaaaaacagccaaaaaaacaacgaagaaaacaaccaagaaatcaacgaagaaaacagcc
aagaagaccgctaaaaaaacaacaaaaaagacttctgctaagaagaaaacttcagagtag
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