Sedimentisphaera salicampi: STSP1_01674
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Entry
STSP1_01674 CDS
T05439
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pbp
Sedimentisphaera salicampi
Pathway
pbp03030
DNA replication
pbp03430
Mismatch repair
pbp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STSP1_01674 (holB)
03430 Mismatch repair
STSP1_01674 (holB)
03440 Homologous recombination
STSP1_01674 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbp03032
]
STSP1_01674 (holB)
03400 DNA repair and recombination proteins [BR:
pbp03400
]
STSP1_01674 (holB)
Enzymes [BR:
pbp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STSP1_01674 (holB)
DNA replication proteins [BR:
pbp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
STSP1_01674 (holB)
DNA repair and recombination proteins [BR:
pbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
STSP1_01674 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
ARN57271
UniProt:
A0A1W6LNE9
LinkDB
All DBs
Position
2239880..2240986
Genome browser
AA seq
368 aa
AA seq
DB search
MSLKDIHSQNHIITAFEDCLNAGRLGQSFIFAGQDGVGRFKCASEIAKLLLCENPAKTEQ
NGKAFQDSCGQCRSCKLFESGSHPDFKHIYKELNKYSEIPEIRKKSPSEFLISVVREFFV
DKAGKKPQLAGKTVFVLSEAEKLNQSAQNAILKTLEEPPPHCIIILICTRTDRLLETILS
RCQVYNFAPVEKNIIARELSRRGVEQNEAFFWAGFTSGSLGKSLELSSLEANCYSIKTEL
LEKLESFSLADAVELAEWLGGCSGEIAGAVGKISGSEGKAGLKRHAQTITLNMVMSAAID
AMKNAAGSEELINHDQPEVIASLSEKIDPYKASKLVEDINSSISMVYSYVNEKLIFEDIL
INFARTKE
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttaaaagatatacacagccagaatcatataataaccgcctttgaagactgtctt
aacgccggcaggctcggccagtcttttatatttgccggtcaggacggcgttgggcgtttc
aaatgcgccagcgagatcgccaagcttcttctttgcgaaaaccccgccaaaaccgagcaa
aacggcaaggcctttcaagacagctgcgggcagtgcagaagctgcaagctatttgaatcg
ggcagccacccagacttcaaacacatatacaaagagcttaacaagtattctgagatcccc
gaaatcagaaagaaatctcctagcgagtttctcatcagcgtagtgcgtgaattcttcgtt
gacaaggcggggaagaagccgcagcttgcggggaaaacagtattcgttctatccgaagcc
gaaaagctcaaccaaagcgctcaaaacgcaatcctcaaaacgcttgaagagcccccgcct
cactgcattataatcctgatctgcacgcgaaccgaccgacttcttgaaacgatactctcc
cgctgccaagtctataactttgcccctgtagaaaagaatataatcgcccgtgagctgtca
cgcaggggggttgagcagaatgaggcgtttttctgggcagggttcacatccggcagcctc
gggaagagcttagagctgagcagcctcgaggcaaactgttattcaatcaagacagagctg
ctcgaaaagctggaatccttcagccttgcagacgctgtagagctggctgaatggctggga
ggatgctctggagaaatcgccggcgctgttggaaaaatcagcggctcagaaggaaaggca
ggcctcaagcggcatgcccaaacgataactctgaatatggttatgtctgctgcgattgat
gcgatgaagaatgcagcaggaagcgaggagctgataaatcacgaccagcccgaagtgatt
gcgtctctaagcgaaaagattgatccctataaggcctcaaaactagtggaagatatcaac
tcgagcatctctatggtctatagctatgtcaatgaaaaattgatttttgaggatattctg
ataaacttcgcccgaacaaaagaatga
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