Sedimentisphaera salicampi: STSP1_02009
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Entry
STSP1_02009 CDS
T05439
Name
(GenBank) Deoxyribodipyrimidine photo-lyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pbp
Sedimentisphaera salicampi
Brite
KEGG Orthology (KO) [BR:
pbp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbp03400
]
STSP1_02009
Enzymes [BR:
pbp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
STSP1_02009
DNA repair and recombination proteins [BR:
pbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
STSP1_02009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ARN57594
UniProt:
A0A1W6LP96
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All DBs
Position
2663213..2664673
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AA seq
486 aa
AA seq
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MAKAKIIFPNQLFEQTGEGCELYVLIEDFEFFGKFSFHKKKLIFHRASMKFYEDYLKSSG
LNTLYIDSADSDSLAAILAGRGVSKAETCEINSTSLEERLKATLSEHGIALSFTPSPAFI
QTKQQVENDLAGGKKYSLTSYYIKRRKQTGILTDSHGKPAGGKWSWDPENRKKLPKGCKL
PKISFPVENSFVREAKGYVSENFPDNPGETGHFFYPITFEDSRNWLDDFIENRLSLFGPY
EDAISRNELIIYHSLLSPLINAGLITPEEILSRLPEYKPQPETLPISSLEGFIRQVIGWR
EFMRGIYLIEGSKQKNSNFWGLERKIPPSFYTAQTGIPPLDDSIRKVHQNAYAHHIERLM
ILGNFMLLCGIAPLEVYRWFMEMFIDAYEWVMVPNVFGMSQYSDGGLITTKPYISSSNYI
RKMSHYPRGQWCQIWDGLYWRFVSSHREVFENNPRMKIMAKLLDSQSVEKFKTHMKNSED
FLGSIF
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
ttggcgaaggcaaagataatatttcccaatcagcttttcgaacagacaggtgaaggctgc
gaattgtatgttctgattgaagatttcgagttcttcggcaaattcagctttcataaaaag
aagctcatctttcacagggcttcaatgaagttctatgaggattatctcaaatccagcggg
ctgaatacgctctatatcgattcagcagattcagattcgcttgcggcaattcttgcaggc
cgcggggtaagcaaggcggaaacctgcgagataaacagcacatcgctggaagaaaggctc
aaggcgaccctgtcagagcatggtatagccctgtcatttacgccgagtcccgcattcatc
cagacaaagcagcaggtagaaaacgatttggccggcgggaagaaatactccctaaccagc
tactacatcaaacgcaggaaacaaaccggcatactcacagattcccatggcaaaccagca
ggcgggaaatggagctgggatccggaaaacaggaagaagcttcccaaaggctgcaaactc
ccaaaaataagctttcccgtagagaacagctttgtaagagaagcgaagggatacgtaagc
gaaaatttccctgataatccgggcgaaacggggcatttcttctaccccattacctttgag
gacagcagaaactggcttgatgactttatcgaaaacaggctgagccttttcgggccatat
gaagacgccatatccagaaatgagctcataatataccactctctcctctcgccgctgata
aacgccggcttaatcaccccggaggaaattctaagccggctccccgaatacaaacctcag
ccggagaccttgccgataagcagtcttgaagggtttatccggcaggtaatcggctggcgt
gaatttatgagggggatatacctcattgaaggcagcaaacagaaaaattccaacttctgg
gggcttgagagaaaaatcccgccaagcttttataccgcccaaacgggcatcccgcccttg
gacgattcaataagaaaggtgcatcaaaacgcatacgcccaccacatcgaaaggctgatg
atcctcgggaactttatgctcctttgcggtatcgcaccgcttgaggtttaccgctggttt
atggagatgtttattgatgcttatgagtgggtgatggtgcctaatgtattcggaatgagc
cagtattcagacggcggactcataaccacaaagccgtatatcagctcctcgaactatatc
agaaaaatgagccattaccctcgcgggcagtggtgccagatttgggacgggctgtactgg
agattcgtcagcagccatcgtgaggtgttcgaaaacaatccaaggatgaagataatggca
aagcttctggattcacaaagcgttgaaaaatttaaaacgcatatgaaaaactcagaagac
ttcctcggctcaattttttaa
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