Sedimentisphaera salicampi: STSP1_02263
Help
Entry
STSP1_02263 CDS
T05439
Symbol
uvrB
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pbp
Sedimentisphaera salicampi
Pathway
pbp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
STSP1_02263 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbp03400
]
STSP1_02263 (uvrB)
DNA repair and recombination proteins [BR:
pbp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
STSP1_02263 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
STSP1_02263 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_30
AAA_16
Kinesin
TrwB_AAD_bind
AAA_7
AAA_19
HerA_C
AAA_25
HAD_Pex22
DUF1106
DUF87
Motif
Other DBs
NCBI-ProteinID:
ARN57837
UniProt:
A0A1W6LPZ4
LinkDB
All DBs
Position
2957285..2959270
Genome browser
AA seq
661 aa
AA seq
DB search
MDQFNLKSQYNPSGDQPEAIKKLVEGISSGRRHQVLLGATGTGKTFTMANVIETVRKPAL
IISHNKTLAAQLYEEMKELFPDNAVEYFVSYYDYYQPEAYIPQRDIYIEKDASRNDDLDR
LRLAATTSLLTRDDVIVVSSVSCIYGLGSPEEYKKNVVPVIKGDIIERDDLLGRFADVLY
ERNDIDFTRGTYRVRGDVVEVWPSYESYAVRVEFFGDEIESIKYINPVSGEALAEEQQVF
IYPAAHYIMAQDRVQNALESIQQELDQRLAEFREEGKLLEAQRLEARTKYDMEMIAEVGF
CSGIENYARHLAGLEPGAKPYTLLDYFPKDFIMFIDESHVTLPQVRAMYAGDRNRKQVLV
DHGFRLPSAMDNRPLRFDEFEQRPGRTVYVSATPGDYELNLTGGEIVEQIIRPTGLLDPK
VEVRPASNQVSDVKSEIYERVEAGQRVLVTVLTKRLAEDLTDFFQKEKIKCRYLHSEIDA
IERVDILRDLRKGEFDVLIGINLLREGLDLPEVAMVAILDADKEGFLRSETSLIQTIGRA
ARNVDSRVILYGDKVTPSMKRAMDETERRRKIQMEYNKKHNITPETIKKAIRSALSDSLK
ARKTARQAVSMDEKEYDKTEMVAMLEKEMMKAAEELDFEKAAKLRDKIKQFESMPKIEKK
K
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggatcagttcaacttaaaaagccaatataacccttcaggagaccagcccgaggcaatc
aaaaagcttgtcgaagggataagctccggccggcgtcatcaggtgcttcttggcgctacg
ggaacgggcaaaaccttcacgatggcaaacgtgattgaaacagtgaggaagcctgcgctt
attatctcgcacaacaaaaccctcgcagcacagctatatgaagaaatgaaggagctgttt
cctgataatgcagttgagtatttcgttagctactacgactactaccagcctgaggcgtat
atcccccagcgggatatatatatcgaaaaggatgcaagcagaaacgacgatctcgaccga
ctacgccttgctgctacaacgagccttctaacccgagacgatgtgattgtggtatccagc
gtttcgtgcatatacggcttaggctcgccggaggaatacaaaaagaacgtggtgcctgtg
attaagggcgatattatcgaacgcgatgatttgcttggacggttcgccgatgtactctat
gaacgaaacgatattgatttcacccgaggcacttacagggttcggggagatgttgttgag
gtttggccttcctacgagtcatacgctgttcgagtggagtttttcggcgatgagattgag
agcataaaatacataaaccccgtttcaggcgaagccctagcggaagaacagcaggttttt
atctatccggcagcgcattacataatggcacaggacagagtgcagaatgcccttgagtct
atccagcaggagcttgatcagaggctcgcagaattccgagaagaaggcaaactccttgaa
gcccagagacttgaagcacgtacgaagtacgatatggaaatgattgcagaagttggtttc
tgcagcgggatagagaattatgcaagacatcttgccggccttgagccaggagccaagccc
tacacacttctcgattatttccccaaagatttcattatgtttatcgatgaatcccacgtt
accctccctcaggtacgtgctatgtatgcaggcgacagaaacagaaagcaggtcctcgtt
gaccatggcttccgccttccaagcgcaatggacaacaggcctcttcgctttgatgaattt
gagcagcgtcctggcagaaccgtttacgtttccgcaacgccgggcgattatgagctcaac
ctcaccggcggggaaattgtagaacagattatacgtcccacaggccttctcgacccgaag
gtagaggtgcgtcctgcaagcaatcaggttagtgatgttaagtctgagatttatgaaaga
gtggaagcggggcagagagttctggttacagtgctgacaaagaggctcgctgaagaccta
acagatttcttccagaaggaaaaaattaaatgccgctatctgcacagcgaaattgatgcg
atagaacgtgttgatatcctgcgtgatctaaggaaaggcgagtttgatgtgctgataggc
attaacctgcttagagaagggctggatcttccggaggttgcaatggtggcaattctggat
gcagataaagaaggcttcctcaggagcgaaacatcccttatccagacaataggcagagcg
gcaagaaatgttgattcaagggttatactctatggcgataaggttaccccgtctatgaaa
cgtgctatggatgaaaccgagagaagacgcaagattcagatggagtacaacaaaaagcac
aacatcacacctgagacaatcaaaaaagccatcagatcagccctctcagattcactgaag
gcgagaaaaaccgcaagacaggctgtttctatggacgaaaaagagtatgataagaccgag
atggtggctatgctggaaaaagaaatgatgaaagcggcagaagagctggatttcgagaag
gccgccaagctgcgggataaaattaaacaatttgaatcaatgcccaagatagaaaagaag
aaatag
DBGET
integrated database retrieval system
