Sedimentisphaera salicampi: STSP1_02289
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Entry
STSP1_02289 CDS
T05439
Symbol
groL_3
Name
(GenBank) Stress protein H5
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pbp
Sedimentisphaera salicampi
Pathway
pbp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STSP1_02289 (groL_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbp03019
]
STSP1_02289 (groL_3)
03110 Chaperones and folding catalysts [BR:
pbp03110
]
STSP1_02289 (groL_3)
03029 Mitochondrial biogenesis [BR:
pbp03029
]
STSP1_02289 (groL_3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pbp04147
]
STSP1_02289 (groL_3)
Enzymes [BR:
pbp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
STSP1_02289 (groL_3)
Messenger RNA biogenesis [BR:
pbp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
STSP1_02289 (groL_3)
Chaperones and folding catalysts [BR:
pbp03110
]
Heat shock proteins
HSP60 / Chaperonin
STSP1_02289 (groL_3)
Mitochondrial biogenesis [BR:
pbp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
STSP1_02289 (groL_3)
Exosome [BR:
pbp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
STSP1_02289 (groL_3)
Exosomal proteins of other body fluids (saliva and urine)
STSP1_02289 (groL_3)
Exosomal proteins of breast cancer cells
STSP1_02289 (groL_3)
Exosomal proteins of colorectal cancer cells
STSP1_02289 (groL_3)
Exosomal proteins of bladder cancer cells
STSP1_02289 (groL_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ARN57863
UniProt:
A0A1W6LQ63
LinkDB
All DBs
Position
3000880..3002505
Genome browser
AA seq
541 aa
AA seq
DB search
MAAKKIAFENEARSAILEGVKKLSNAVKITLGPCGRNVVLEKSMGSPTVTKDGVTVAKEI
ELEDSYENMGAQMVKEVASKTSNVAGDGTTTATIMAEAIFTEGLKNITAGADPMKVKRGI
DAAVEAIVEQLRKKSITIESSKQIEQVARCSANHDPGIGKVLAKAMDKVGKDGVITVEEG
QSLETTVDLVEGMQFDKGYLSPHFVNNTENMTVNLDKPYVLIHEKKISSVKNLVPILEKV
SKQGKPLLIIAEDIEGEALTTLVVNKLRGILNVAAVKAPGFGDRRKAMLQDIAVLTGGQA
IMEDLGIQLENVELAQLGMAKKVTIDKDNTTIVEGGGSSEDISARIEQIKNEYNISTSDY
DKEKLQERLAKLSGGVAQINVGAATEAEMKEKKARVEDALHACRAAVEEGILPGGGVSAL
GAIKNIGSLKLKGDEQVGADIVKRAVFAPIKQIAKNAGLDGSIVSQKVYENDEPNFGYNA
LTKEYGDMIDFGVIVPTKVERSALQNAASIASLLLTTDAVVSDIPDDKDSSGGGMPGGGM
M
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaaaagattgcttttgaaaatgaagcccgttcggcgattcttgaaggcgtt
aagaaactctcaaacgccgtaaagattacgctcgggccgtgcggaagaaacgtggttctc
gaaaaatctatgggctctccaactgttaccaaagacggtgttacagtggcaaaggaaatt
gagcttgaggattcttacgagaatatgggcgctcagatggttaaggaagtggcttccaaa
acaagcaacgttgcgggcgacggtactacaactgcaacgattatggctgaagctattttt
accgaaggcctgaagaacattacagccggcgcagaccctatgaaagttaagagagggatt
gacgccgctgttgaggctatagttgagcagctcaggaagaaatctatcactatagaatct
tccaaacagattgaacaggttgcacgttgctcggcaaatcacgaccctggaatcgggaaa
gtgcttgccaaggcgatggataaggtcggcaaagacggcgttatcaccgttgaggaaggt
cagtctcttgagacaactgtagatcttgtagaaggtatgcagttcgacaaaggctacctc
agcccccattttgtaaacaacacagaaaatatgacagtgaacctcgataagccttatgtg
cttatccacgagaagaaaatcagctctgtgaagaatcttgttccgattttggagaaggtc
tctaaacagggcaagccgcttctgattattgcagaggacattgagggcgaagcccttaca
actctcgttgtaaacaagctcagaggcattttgaacgtagctgctgttaaggcgcccggc
tttggagaccgcagaaaggctatgcttcaggatatcgccgtcctaacaggcggacaggcg
attatggaagacctcggcattcagcttgagaatgtagagctcgctcagctcggtatggcc
aagaaggttactatcgataaagacaatactacaattgttgagggcggcggaagcagcgaa
gatatctctgcaaggatcgaacagatcaaaaacgagtacaacatatcaacaagcgattat
gataaagaaaagcttcaggaacgtcttgccaagctctccggcggcgtggctcaaattaac
gtgggcgctgctaccgaagctgagatgaaagagaagaaggcgagagtggaagatgccctt
catgcctgcagggctgctgtagaggaaggcattctccccggcggcggcgtttcagctctg
ggagctataaagaatatcggttcgctcaagctcaaaggtgatgagcaggtaggtgctgat
attgttaaaagggcggtttttgccccgattaagcagatcgcaaagaacgcagggctcgac
ggttctatcgtttctcagaaggtttatgaaaacgacgagccgaacttcggctataacgcc
ctcacgaaagagtacggcgatatgatcgatttcggcgttatcgtgcctaccaaggtggaa
agaagcgctttacagaatgctgcttcaattgcttctctgcttcttacaacagatgcagta
gtaagcgatatacctgatgataaagactcctcaggcggcgggatgcccggcggcggaatg
atgtaa
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