Peptostreptococcaceae bacterium oral taxon 929: C3V37_00950
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Entry
C3V37_00950 CDS
T05383
Symbol
polC
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
pbq
Peptostreptococcaceae bacterium oral taxon 929
Pathway
pbq03030
DNA replication
pbq03430
Mismatch repair
pbq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C3V37_00950 (polC)
03430 Mismatch repair
C3V37_00950 (polC)
03440 Homologous recombination
C3V37_00950 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbq03032
]
C3V37_00950 (polC)
03400 DNA repair and recombination proteins [BR:
pbq03400
]
C3V37_00950 (polC)
Enzymes [BR:
pbq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C3V37_00950 (polC)
DNA replication proteins [BR:
pbq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C3V37_00950 (polC)
DNA repair and recombination proteins [BR:
pbq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C3V37_00950 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
HHH_6
Rv2179c-like
DEDDh_C
RNase_H_2
HHH_3
T2SSK
Motif
Other DBs
NCBI-ProteinID:
AVM66499
UniProt:
A0A2P1G2I1
LinkDB
All DBs
Position
complement(207396..211649)
Genome browser
AA seq
1417 aa
AA seq
DB search
MIKLFKPEELNINIDFLSDDDKIFFESPVLNEKTLKITYYYNLKEQSLAPKVDELIKSTF
LKFSLSDVNINAIQYTKCSEYFNSIRNEFTDIDEKALSYEEDDASYTFTLDNQLILDSFN
ANPFLELMRSLCASFENKAIKTKCKEIVINKEEFIDQLKNNAEQISESFKIVKEEKKKSE
ASAENGGKKSFFRKKKEIDKNKCIKIKDITSDMDFITIQGEVFAYEFVDRDDYALVKFAI
DDGEEAIRVSKFIRKNKEGKYDYEYDIDNGVKLYLCGNVNLFQNIMSIKIYSYEIISEEK
TDEETEDIKRVEIGLHTKMSSQEGFISAKEYFKEAKKRGYDSLGFIDKNVVQSYPEIMDA
AIETGIKPLYGVEANLFDDTKTLVNNYKGDNKNTFVVFDVETTGFSATDDRVIEMGAVKI
KDGKVIDNFSEFTDPGFHIPYRITELTTIDDATVAGCPSFDEILENFMDFCKDSVLVAHN
AEFDISFIKSSMHRKGIKFDYEYIDTLELSRYLLPDLKKHRLDTLTALFNINLENHHRAI
DDATATGFVFLKLLDLLKEQNCNNLDDMSKIKSQNYYNVHNISIFATNLTGLKNLYRLIS
LSHIDNYNRQPIVYKSQIDENREGLLVGGGSYNGPIYNALIRCEEIDKLKEMIKYYDFVE
LQPMDQYLYLIEDESLHEMDSIKNINRRLYDAAKEVNVPVLANGDVYYIDQSDSVYRSIL
VFNRKNFVGSRKECNNTDHYFKTTKELLNSFPYLSEDETKEIVIDNTLAFAEKFENIRPI
PKDTFPPFIENSDKDLRDCCYNKATSIYGDPLPEIVKKRLDKELDSIIGNGYAVLYIIAR
KLILQSNTDGYVVGSRGSVGSSFAATMSDITEVNPLIPHYVCPNCKHSEFVDDPKYDSGF
DLPRKNCPICSHEMNRDGQKIPFEVFLGFNGDKEPDIDLNFAGDYQLTAHKNTEKIFGEN
FVFRAGTIGTLADKTAAACILDYLEKKNKNISYLHAMFLSKRIKGSKRTTGQHAGGVMVV
PKNKSILDFTPVQKPADDMGTDIITTHFDYHSISGKILKLDLLGHDVPNIIKNLEDLTNT
KIEDIPFDDEKTLSIFSSTDALGIDKDDLKFGVGTIAIPEFGTNFVRGMLKDTKPKTFSD
LVRISGLSHGTNVWNSNAEKLVNEMNVPMSEVISTRDDIMNQLIDAGMDKSTAFKIMEFV
RKGKPLIQKKIVDNETIIVNYEDEIKKYPLPEWYLDSCHKISYLFPKAHAAAYVMMSYRL
AWYKIYYPAAFYATYFTQKINDFDYDALVQKIDNLDALMSEISQNQQAKKKDEDLLSLAE
VVKEMQLRNISIAPIDLDKSLATKFTVIDGEIIPPFTVIAGLGKDPANNIIRERELKEFN
SIEDFQKRTQVNSTVIAYLKSINFFKDMHETNQISLF
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atgataaaattatttaaacctgaagaactgaatataaatatagattttctttcagatgat
gataagatattttttgaaagtcctgttcttaatgaaaagacacttaaaataacatattat
tataatttgaaagagcaaagtctagctccaaaagtagatgaattaattaagtctactttt
ttaaaattctctttatcagatgtaaatattaatgcaatacaatatacaaagtgcagcgaa
tatttcaattcaataagaaatgaattcactgatatcgatgaaaaagcattaagctatgaa
gaagatgatgcatcatatacatttacacttgataatcagttaatactagatagcttcaat
gcaaatcctttccttgaactgatgagatctttgtgcgcaagctttgaaaataaggctata
aagactaaatgcaaagaaattgttatcaataaagaagaatttattgatcaattaaaaaat
aacgctgaacaaataagtgaaagctttaaaattgttaaagaagaaaagaaaaaaagcgaa
gcaagtgctgaaaacggcggtaaaaaatcatttttcagaaagaaaaaagaaattgataaa
aataaatgcatcaagataaaagatatcacttctgacatggactttattacaatacaagga
gaagtctttgcttatgagtttgttgacagagatgattatgccttagttaaatttgctata
gatgacggtgaagaggctatcagagttagtaaattcataagaaaaaataaagaaggaaaa
tatgattatgaatatgatatagataacggagttaaattatacctttgtggtaatgttaat
ctttttcaaaatatcatgagcataaagatttacagctatgaaataattagtgaagaaaaa
acagatgaagaaacagaagatataaagagggtagaaataggactacacactaagatgtca
agtcaagaaggctttatatcagctaaagaatattttaaagaagcaaaaaagagaggctat
gattcgctcggcttcattgacaaaaatgttgttcaaagctatccagaaattatggatgca
gctatagaaacaggtattaaacctttatatggtgtagaagcgaatttatttgacgataca
aaaactttagtaaacaattacaaaggcgataacaaaaacacctttgttgtttttgacgta
gaaactacaggcttttcagcaactgacgatagagttatagaaatgggtgccgtgaagata
aaagatggcaaagttatagataatttctcagaatttactgatcctggttttcatataccg
tatagaattacagaattaactacaattgatgatgctactgtagctggctgcccatcattt
gatgaaatattagaaaattttatggacttttgtaaagattcagttttagtcgctcataac
gctgaattcgatatttcttttattaaaagctctatgcacagaaaaggaatcaaatttgat
tatgaatatatagatacacttgaactttctagatatttattgccagatttgaaaaagcat
agactagatacattaacagctctatttaatatcaatctagaaaatcatcatagagcaata
gatgacgcgacagctacaggttttgtgttcttaaagcttttagatttattaaaagaacaa
aattgcaataatcttgatgatatgtcaaaaatcaaatcacaaaattattataatgttcac
aatatttcaatatttgctacaaatttaacaggtttaaaaaatttatatagactgatttct
ctatctcatattgataattacaatagacagccaattgtttataaaagtcaaatagatgaa
aacagagaaggccttttagtaggaggaggctcttataatggacctatatacaacgcctta
attagatgtgaagagatcgataaacttaaagaaatgatcaaatactatgactttgtcgag
cttcaaccaatggaccaatatctttatttaatcgaagatgagagccttcacgaaatggat
tcaattaaaaatattaatagaaggctatatgatgcagcaaaagaagtaaatgttccagta
cttgctaatggcgatgtttattatattgatcaaagtgatagcgtttatagatcaatttta
gtctttaacagaaaaaattttgtaggaagcagaaaagaatgtaataacacagatcattat
tttaaaactacaaaggaattattaaatagttttccttacttaagcgaagatgaaacaaaa
gaaattgttattgataatactttagcatttgcagagaaatttgaaaatataaggccaatt
cctaaagataccttcccgccatttattgaaaattcagataaagaccttagagactgctgc
tacaataaagctacaagcatatatggagatccacttccagagatagttaaaaagaggctt
gataaagagcttgattcaataattggcaatggttatgcggttttatacatcatagcaaga
aaacttattttacaatcaaataccgatggctacgttgttggttcaagaggctctgtcggc
tcatcatttgcagctactatgagcgatataactgaggttaatccacttatacctcactat
gtgtgtccaaattgtaagcacagcgaatttgtcgatgatccaaaatatgattcaggcttt
gaccttcctcgtaaaaattgtccaatatgttcacatgaaatgaatagagacggacaaaag
ataccattcgaagtatttttaggttttaatggagataaggaaccagatatagacctaaac
tttgcgggcgattatcaattgacagcacataaaaatacagaaaagatattcggtgaaaat
tttgtattcagagctggaaccattggtactctagctgataagactgctgctgcttgtatc
ttggattatcttgagaagaaaaataaaaatatttcatatttgcacgctatgtttttaagt
aaaagaataaaaggctcgaagagaacaactggccaacacgctggcggggtaatggtagtt
cctaaaaataagagcatactagattttactccagttcaaaaaccagctgatgacatggga
acagatataattacaacgcatttcgattatcactccataagcggtaaaatacttaagctt
gaccttcttggtcatgatgttcctaacattataaaaaatcttgaagacctaactaatact
aaaattgaggatataccatttgatgatgaaaaaacattgtcaatattttcatcaactgac
gctttaggtattgataaagatgatttaaaatttggtgtaggaaccatagctataccagaa
tttggtacaaactttgttagaggcatgcttaaagatacaaagccaaaaacattctcagat
cttgtaagaataagtggtctttcacatggaacaaacgtttggaatagtaacgcagaaaaa
cttgtaaatgagatgaatgtacctatgtcagaagttatatctactagagatgacatcatg
aaccaattaattgatgcaggcatggataaatctacagcatttaaaataatggagtttgtt
agaaaaggtaaaccattaatacaaaagaaaattgttgataatgaaactataattgtaaat
tatgaagatgaaataaagaagtatccactaccagagtggtacctagatagctgtcataaa
atttcatatctatttccaaaagcgcacgctgctgcctatgttatgatgagctacagactt
gcttggtacaaaatttattatccagccgcattctatgcaacatattttactcaaaagata
aatgattttgattatgacgctcttgttcaaaaaattgataatttagatgcgttgatgagc
gaaatttctcaaaaccaacaagcaaagaaaaaagatgaagatctgttatctttagcagaa
gtagttaaagaaatgcagcttagaaatataagtattgcgccaatagatttagataaatct
ctagcaacaaaatttactgttattgatggtgaaatcattccgccatttacagtaattgct
ggacttggtaaagatccagctaataacataattagagagagagaacttaaagagtttaac
tcaattgaggactttcaaaaaaggactcaggtcaacagcacagtaattgcatatttaaaa
tctataaacttttttaaagatatgcatgaaaccaaccagataagcttattttaa
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