Parvularcula bermudensis: PB2503_00917
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Entry
PB2503_00917 CDS
T01298
Name
(GenBank) DNA photolyase-like protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pbr
Parvularcula bermudensis
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbr03400
]
PB2503_00917
Enzymes [BR:
pbr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PB2503_00917
DNA repair and recombination proteins [BR:
pbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PB2503_00917
Prokaryotic type
PB2503_00917
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ADM08264
UniProt:
E0TB60
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All DBs
Position
83234..84508
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AA seq
424 aa
AA seq
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MSQSSMFPEAGAAPLAYASSLAFVPTRAAALARLDAFAPNMGSLYAKNRNRDDGPADRRY
VSCLSPYLRHRLITEQEVIAAALNRFAFSTAEKFIQEVYWRTYFKGWLERRPWVWDLYTD
DRDRRLNELSGDQATAYQAAVEGRTGIDGFDAWTKELIATGYLHNHARMWFASIWIFTLR
LPWSLGADFFHRHLLDGDAASNTLSWRWVGGLHTKGKTYLARPSNIEKFTNGRFSPSPED
LAKEAPALEDDWNGEPGDPPGDLPLTSRDPAFLLLHEEDLGLETLPVEKARLVGVGLFVD
PACRSAAPVGGLVSQFTQGAIDDTRHRAKTVVGCDAVIVPDEDNLLEAVTAAGANTVILP
YLPVGPLRGPVARMTGRLAAEGFRVETMLRSHDRHAWPHASKGFFRLKKKIPSLIARERT
PSLL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaatcatcgatgttccccgaagctggggccgcccccctggcctatgcctcgtcc
ttggcctttgtgccgacacgagcggctgcccttgcgcgactcgacgccttcgcacccaat
atgggcagtctttatgcgaaaaatcggaaccgcgacgatggacctgcggatcgacgctac
gtttcctgtctgtcaccttatcttcggcatcggctgatcaccgagcaggaggtcattgcc
gccgctctcaaccggttcgccttttccactgcggaaaagttcattcaggaggtctattgg
aggacttatttcaagggctggctggagcgtcgcccctgggtctgggatctctatacggat
gaccgagaccgccggcttaatgaattgagcggcgatcaagccacggcctatcaggcggca
gtcgagggccgtaccggcattgacggtttcgatgcctggacaaaggaactcatcgccacc
ggctatttgcacaatcacgcgcggatgtggttcgccagtatctggatctttacccttcgc
ctcccttggagtttaggcgctgacttctttcatcggcatttgcttgacggcgatgccgcc
tccaataccctctcctggcgatgggtcggcggactgcatacaaagggcaaaacctatctc
gcccgtccaagcaatatcgagaaattcaccaatgggcgtttctctccgtcgccggaggac
ctcgccaaggaggccccggcccttgaggatgattggaacggtgagcctggcgatccgccc
ggcgacttaccgctgacgagccgcgacccggcttttttgttgctgcatgaggaggatctg
ggattggagacccttcccgtggaaaaggcacgccttgtcggggtaggcctgttcgtcgat
ccggcatgtcgcagcgcggcaccggtggggggtcttgtgtctcaattcacccaaggcgcg
atcgacgatacgcgccatcgggccaaaacggtggttggttgcgatgccgtcattgtaccg
gacgaggacaatctgctggaagcggtcaccgccgccggcgccaacaccgtcatcctgccc
tatctgcccgtaggcccattaagaggtcccgtagccagaatgacaggaaggcttgccgcg
gagggatttcgcgtggagacgatgctacggtcccacgaccgccatgcatggccccacgcg
tcaaagggcttttttagactcaagaaaaagatcccctcactgatcgcgcgagagcgaacg
ccgtccctcctctga
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