Parvularcula bermudensis: PB2503_01092
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Entry
PB2503_01092 CDS
T01298
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pbr
Parvularcula bermudensis
Pathway
pbr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PB2503_01092
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pbr01007
]
PB2503_01092
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbr03016
]
PB2503_01092
Enzymes [BR:
pbr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
PB2503_01092
Amino acid related enzymes [BR:
pbr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
PB2503_01092
Transfer RNA biogenesis [BR:
pbr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PB2503_01092
Prokaryotic type
PB2503_01092
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
ADM08298
UniProt:
E0TB94
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All DBs
Position
complement(121803..123080)
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AA seq
425 aa
AA seq
DB search
MHDIRAIKDDPDGFDAAMSRRGVAIKAADLIALDERRVANTKAMNEAQAAQKQASKAIGQ
AMGAGDQAKAEALKAEVAALKASVQEREADDRRLSDELRAALLPIPNRLAPDVPDGESED
DNVEIRRWGTPPDIATPQDHVDLGEGLGQMDFETAAKISGSRFALLTGDLARLERALATF
MLDLHRHEFGYIEVSPPVLVRDDALVGTGQLPKFEEDLFKTTSGHYLTPTAEVPLTNLVR
DSLLEEDSLPRRYTAYTPCFRSEAGSAGRDTRGMIRLHQFSKVELVSITTPEEGHQEHER
MTQAAETVLQRLDLPYRVVTLCAGDIGFGALKTYDLEVWLPAQNTYREISSCSYVGDFQA
RRMNARFRREGEKKPLYVHTLNGSGLAVGRTLVAVLENYQEADGAIRVPDALQPYIGQSR
IERAS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcacgatattcgggccattaaggacgatcccgacgggttcgatgcggcgatgtcgcgc
cgcggggttgccatcaaagcggcggatctgatcgcccttgatgagcggcgggtggccaat
accaaagcaatgaacgaggcccaggccgcccagaaacaggcgtcaaaggcaatcgggcaa
gccatgggggcgggcgaccaggcgaaggccgaagcgctcaaggcggaggtcgccgccctc
aaagccagcgttcaggagcgtgaagccgacgacaggcggttgtccgatgagttgcgggcg
gccttgctgcccatccccaatcgcctggcgcccgatgtgcccgacggggagagcgaagac
gacaatgtcgagatccgccggtggggcaccccgccggatatcgcaaccccgcaggatcac
gtcgatcttggcgagggacttggtcagatggatttcgagacggccgccaagatatccggg
tcgcgatttgccctcttaacgggggatctcgcccgattggagcgggccctcgccaccttc
atgctcgatttgcaccgccatgagttcggctacatcgaggtcagcccgccggttctcgtg
cgggacgacgcgttggttggcacggggcaattgccgaaattcgaggaagacctcttcaaa
accacctcggggcattacctgacccccaccgccgaggttccgctcaccaatcttgtccgg
gacagcttgcttgaggaagacagcttgccgcgccgatatacggcgtacacgccctgtttc
cgctccgaagccggatcggccgggcgtgacacccgcggcatgatcaggctccaccaattc
agcaaggtcgaactggtctcgattacgaccccagaggagggccatcaggaacatgagcgg
atgacacaggcggctgagacggttctccagcgcctcgatctgccctatcgggtcgtcacg
ctctgcgccggcgatatcggcttcggcgccctcaagacctatgatcttgaggtctggctg
cccgctcagaatacctatcgagagatttcctcctgctcctatgttggcgactttcaggcg
cgacgcatgaatgcccggttccggcgggagggggagaaaaagccgctttacgtgcatacc
ctcaacgggtcggggctggcagtgggacggaccttggtcgccgtccttgaaaattatcag
gaggccgacggggccattcgtgtgcccgacgcgcttcaaccctatatcggtcagagccga
atagagagagcgtcatga
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