Parvularcula bermudensis: PB2503_01207
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Entry
PB2503_01207 CDS
T01298
Name
(GenBank) endopeptidase Clp: ATP-binding subunit B, clpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pbr
Parvularcula bermudensis
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pbr03110
]
PB2503_01207
Chaperones and folding catalysts [BR:
pbr03110
]
Heat shock proteins
HSP100
PB2503_01207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_22
AAA_16
nSTAND3
Sigma54_activat
AAA_24
IstB_IS21
RuvB_N
TniB
Mg_chelatase
AAA_7
AAA_23
AAA_14
AAA_25
NACHT
T2SSE
DUF7310
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
ADM08321
UniProt:
E0TBB7
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All DBs
Position
complement(147281..149944)
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AA seq
887 aa
AA seq
DB search
MNFDKYTDRAKGLVQAAQTIAIRENHQQITPFHVLKALLDDSEGLAANLMRRAGGDPDLA
LTAVDQALAKLPTVQGANAQVYMAQPTARIFTQAEDIAKKAGDSYVTAERLLVALALEGE
TAATLKKAGLSPQSLNTAINEIRKGRTADNANAEQGYDALKRYARDLTDAAREGKLDPII
GRDEEIRRAMQILSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKRLLALD
LGSLIAGAKYRGEFEERLKAVLSETTSAEGQIILFIDEMHTLVGAGKTDGAMDASNLLKP
ALARGELHCIGATTLDEYRKYVEKDAALARRFQAVFVSEPTVADTISILRGLKEKYELHH
GVRIADSAIVSAATLSNRYITDRFLPDKAIDLVDEAASRLRMAVDSKPEELDALDRQIIQ
MKIEREALLKEDDTASKDRLTDLEKGLAALEERSAELTAAWQAEKEALASTTSVKEELDR
ARQDLVDAERRGDLAKASELKYGQIPALERRLEEAEGRQDADGVNSGLVQEVVDSETIAQ
VVSKWTGIPVDKMLEGERDKLLRMEEVLHSRVIGQEEAVTAVSAAVRRARAGLQDPNRPL
GSFLFLGPTGVGKTELTKALAAFLFDDDQAIARIDMSEFMEKHAVSRLIGAPPGYVGYEE
GGVLTEAVRRRPYQVILFDEVEKAHPDVFNILLQVLDDGRLTDGQGRVVDFKNTIIILTS
NLGAEYMTGLAEGQTVETVREQVMAAVRSAFRPEFLNRLDEIILFSRLERDQMGGIVDIQ
IARLQSLLDDRKIVIEIDDAARQWLAQSGYDPAFGARPLKRVIQKAVQDPLAERLLAGRI
SDGATLHLSADDTGLILDGEHLTSRKAFSLGTVPTSDAGSPPTHMLN
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgacaaatacacggaccgcgccaagggcctggtccaggcggcgcagaccatt
gcgatccgggaaaatcaccagcagattacgcccttccacgttctgaaggcattgcttgac
gacagtgaagggcttgcggcgaatctgatgcgccgtgccgggggcgaccctgatctggcg
cttaccgccgtcgatcaggcattggcaaaattgccgaccgttcaaggggcgaacgcacag
gtctatatggcccagcccaccgcccgtatttttacccaggccgaggatatcgcgaaaaag
gcgggcgacagctatgtcaccgcagagcgtctactcgtcgctctggcgcttgagggggaa
acggcggcgaccttgaaaaaggcggggctgtcccctcaatcactcaatacagccatcaat
gaaatccgcaaaggtcgtacagcggataatgcgaatgcggagcagggatatgacgcgctc
aaacgctatgcgcgtgatcttaccgacgccgcgcgcgaagggaagctcgatccgatcatc
ggccgtgacgaagaaatccgccgagccatgcaaatcctgtcccgccgtaccaagaacaac
cccgttctgatcggtgaaccgggggtgggtaagaccgccatcgccgaggggctggccttg
cggattgtcaatggcgatgtgcctgagagcctcaaggataaacggctcctcgccctcgac
cttgggtctctcatcgcgggggccaaatatcggggtgaattcgaggagcggctgaaggcc
gtgttgtcggagacgacatcggcggaggggcaaatcattctcttcatcgatgagatgcat
accttggtgggggccgggaagaccgacggcgccatggatgcctccaacctgctgaagccc
gcgctggcccgcggggaattgcactgcatcggcgcgacaaccctcgacgaatatcgtaaa
tatgtcgagaaggatgcggcccttgcgcgtcgcttccaggctgtgttcgtcagtgagcca
acggttgccgatacgatctctatccttcgtgggctgaaagagaaatatgagttgcaccat
ggcgtgcggattgccgacagcgcgattgtttccgcggcgactttatcgaaccggtatatt
accgatcgttttttgcccgataaggcgattgaccttgtcgatgaggcggcctcacggctc
cgtatggccgtggattcaaagcccgaggagctcgatgccctcgatcggcagatcatccag
atgaagatcgagcgggaggcccttctcaaagaggacgataccgcgtcgaaagatcggttg
acggatttggagaagggccttgccgcgcttgaggagcggtcggccgagctgacggccgcc
tggcaggcggaaaaagaggcgctggcctcgaccacgtcagtcaaggaagagctcgacaga
gcccggcaggatctggtggacgccgaacggcggggcgatttggccaaggcctcagagttg
aaatatggccagatcccggccctggagcgtcggcttgaggaggcggagggccgtcaggat
gcggacggggtcaattcaggtcttgtgcaagaggtcgtggatagcgaaacgatcgcgcag
gtcgtttcgaaatggaccggtatccccgtcgacaagatgcttgagggggagcgtgacaaa
ctcctccgtatggaggaggttctccactctcgcgtgatcggacaggaggaggcggtgacc
gccgtatccgccgccgtcaggcgcgcgcgggcgggattgcaggatcctaaccgtcccctt
ggatcgttcctcttcctgggcccgacaggggttggcaagaccgagctgacaaaggccttg
gcggcgtttctgttcgatgacgatcaggccattgcgcggatcgatatgtcggagttcatg
gaaaagcacgcggtcagtcgcctgattggcgcgcctcccggctatgtcggctatgaggag
gggggcgtgttgaccgaggctgtccgtcggcgcccttatcaagtgatcctgttcgatgag
gtggaaaaggcgcacccggatgtattcaatatcctccttcaggtcttggacgatggccgc
ctgacggatggtcaggggcgggtggtcgatttcaagaatacgatcattatcctcacctcc
aatcttggcgcggagtatatgaccggccttgccgaaggacagacggtagagacggtacgg
gagcaggtgatggccgccgtcagaagtgcgttccggccggaattcctcaatcgtctcgat
gagatcattcttttctcgcgtcttgagcgagatcagatgggcggtatcgtcgatatccag
atcgcgcggctacaatcgcttctcgatgatcgaaagatcgttatcgagattgatgacgcg
gctcggcagtggctcgcgcaatcgggatatgatccagccttcggtgcgcgcccgctcaag
cgggtgatccaaaaggccgtgcaagacccgcttgcagagcgtctattggcgggccgcatt
tccgatggagcaacgttgcatctgtctgcggatgatacggggttaattctcgatggggag
catttgacgagtcggaaagccttctccctcgggaccgtgccgacatccgatgccggatcc
cccccaacccacatgctaaattga
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