Entry |
|
Name |
(GenBank) DNA helicase RecQ
|
KO |
|
Organism |
pbr Parvularcula bermudensis
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:pbr00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PB2503_01737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pbr03019]
PB2503_01737
03400 DNA repair and recombination proteins [BR:pbr03400]
PB2503_01737
Enzymes [BR:pbr01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PB2503_01737
Messenger RNA biogenesis [BR:pbr03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PB2503_01737
DNA repair and recombination proteins [BR:pbr03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PB2503_01737
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(271073..272305)
|
AA seq |
410 aa
MAQPAVQYAPPHADSLEEGLAAFGVAAFRPGQRRVIGHLMRGEDVLALMPTGAGKSLCYQ
LPAYLLSGVAIVVSPLIALMENQVQSLHARGIRAGMIHSGRDRAQNIADWTAAREGQLDL
LYMSPERLMTGRMLSALRSLPVTLIAVDEAHCISQWGHQFRADYRQLGQLRTVFPKIPIA
AFTATADRDTEADIKAALFGGEVARVRLSLDRPNLFLGVHDKTPRDGKLHSLLAWHRGES
GIVYCRTRRGTEAVARQIEASGRRAFAYHAGLPETERLEILNAFTERRGLVIAATVAFGM
GIDKPDIRFVIHRDLPSSLEAYYQEIGRAGRDGAPAKAHLLYGRGDVIARRRLIENSEAD
SLVKQAETRRLGTMVDFAETVGCHRMALLAHFGERSPAPCGRCTGCREGR |
NT seq |
1233 nt +upstreamnt +downstreamnt
atggcgcagcctgccgttcagtacgcgcccccacacgccgattccctcgaggaggggctg
gccgccttcggagtcgccgcctttcgccccggtcagcgccgggtcatcgggcatttgatg
cggggcgaggacgtgctcgccttgatgccaacgggggcggggaaatccctttgttatcaa
ctcccagcttatttattatcaggggtggcgattgtcgtctcgccgctcatcgcgctgatg
gaaaaccaggtccagtcgctgcatgcgcggggcatcagggcgggtatgatccattcgggg
cgggatcgcgcccagaacatcgccgactggaccgctgcgcgggaaggacagctcgacctc
ctttatatgagccctgagcgcttgatgaccggccgcatgctttcggcgctgcggtcgttg
cctgtcaccttgattgccgtcgacgaagcccattgcatcagccaatggggccatcaattt
cgcgccgattaccgccaattgggccagttacgaacggtgtttcccaagatccccattgcg
gccttcacggcgacggcggaccgggacaccgaggcggatatcaaggcggcgctgttcggc
ggggaggttgcacgggttcgccttagcctcgaccggccgaacctttttctcggtgtccac
gacaaaacgccccgggatgggaagctccacagccttctggcctggcatcggggggagagc
ggcatcgtctattgtcgaacccgccgcgggacggaggccgtggcccggcaaatcgaggcg
agcgggcgtcgcgcctttgcctatcatgccggactgcccgagaccgagcggctggagatc
ctcaatgccttcactgagcggcggggcctcgtgattgcggcgacggtcgctttcgggatg
ggaatcgacaagcccgatatccgctttgtgattcaccgcgatctcccctcgagcctcgaa
gcctattaccaggaaatcgggcgggccggtcgcgatggcgcccccgcaaaggcgcatctt
ctctacggccggggtgacgtcattgcccgtcgccggttgattgagaacagcgaagcggac
tccctcgtcaaacaggcggaaacccgtcgacttggcaccatggtcgacttcgccgagacg
gtggggtgccatcgcatggccctgcttgcccatttcggcgaacggtccccggccccctgc
ggacgctgtacaggatgtcgcgagggccgataa |