Parvularcula bermudensis: PB2503_02102
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Entry
PB2503_02102 CDS
T01298
Name
(GenBank) Putative mutY, A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
pbr
Parvularcula bermudensis
Pathway
pbr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PB2503_02102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbr03400
]
PB2503_02102
Enzymes [BR:
pbr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
PB2503_02102
DNA repair and recombination proteins [BR:
pbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PB2503_02102
Prokaryotic type
PB2503_02102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
HHH_8
EndIII_4Fe-2S
RecR_HhH
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ADM08499
UniProt:
E0TC66
LinkDB
All DBs
Position
complement(341665..342723)
Genome browser
AA seq
352 aa
AA seq
DB search
MTRSDKTAFSTSLLEWYDRHARQLPWRISPAASRAGVRPDPYRVWLSEIMLQQTTVATVT
PRFAAFVQRWDGFPALAEAPLEEVLGEWAGLGYYSRARNLHACAKVVTRLHDGQLPASES
ALKDLPGIGPYTAAAIAAIAFDRRAVVVDGNVERIMVRQAAIERPIKEAKAAIYALAAEV
VPDRRGGDYAQALMDLGATICRPRRPDCLLCPVRSSCRAHALGLEAQLPVKPPKKKRPTR
RGIIYVGIGPRGCVLSETRPAKGLFGGMRGLPGSAWTEEGGDEEGAPFEADWQCAGRISH
TLTHFHLELDVKWAPTEGAPAPFFWTPIAEHGAFPTLFRKAAVAALSAAGEL
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgctcggacaagacggcattctcaacatcccttttggagtggtatgatcgtcac
gcgcggcagctgccctggcggatcagccccgcggcctcgcgagcgggggtgcgtccggac
ccctatcgggtgtggctgtcggaaatcatgctgcaacaaaccaccgtcgccaccgtcaca
ccgcgcttcgccgcctttgttcagcggtgggacggctttccggcattggctgaggcacca
ctggaagaggtgctgggcgaatgggcgggccttggctattacagccgggcccggaatctc
catgcctgcgcaaaggtcgtgacacgtctgcacgatggtcaattgccagccagcgaatcc
gccctcaaggacctccccggaattggtccgtacaccgctgccgccattgcggcgattgcc
ttcgaccggcgcgcggtggtggtggatggcaatgttgaaaggatcatggtgcgacaggcc
gcgattgagcgaccgatcaaagaggcgaaggcggcgatttatgcgctggccgccgaggtc
gttcccgatcggcgcggcggcgattatgcccaagccttgatggatcttggggcgacgatt
tgtcggccgcgacgccccgactgtctgttatgtccggtccgctcgtcctgtcgcgcccat
gccctggggctcgaagcccagctgccggtgaagcccccaaagaaaaagcggccaacgcgg
cgcggtattatctatgtggggattgggccaaggggctgtgtcctcagcgagacgcgtccg
gcaaaggggctcttcggcggcatgcggggtctgccggggtcggcatggaccgaagagggc
ggcgatgaggagggcgcgccctttgaagcggactggcaatgcgcggggcggatcagccat
acgctgacccattttcatctcgagctcgatgtcaaatgggccccgacggagggggcgccg
gcgcctttcttctggacaccgatcgccgagcatggcgcatttcccaccctctttcgcaaa
gcggcggtcgccgccctaagcgcggctggggagctatga
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