Parvularcula bermudensis: PB2503_04512
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Entry
PB2503_04512 CDS
T01298
Name
(GenBank) phenylalanyl-tRNA synthetase, beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pbr
Parvularcula bermudensis
Pathway
pbr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PB2503_04512
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pbr01007
]
PB2503_04512
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbr03016
]
PB2503_04512
Enzymes [BR:
pbr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
PB2503_04512
Amino acid related enzymes [BR:
pbr01007
]
Aminoacyl-tRNA synthetase
Class II (U)
PB2503_04512
Transfer RNA biogenesis [BR:
pbr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PB2503_04512
Prokaryotic type
PB2503_04512
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
B5
FDX-ACB
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
ADM08977
UniProt:
E0TF59
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All DBs
Position
complement(831716..834091)
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AA seq
791 aa
AA seq
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MKFTLSWLKRHLETDASIDEIADMMVRIGLEVEDISNPADALSAMSVGHILRAERHPDAD
KLQVCTVATKDGEKQIVCGAPNARADLKVAYAPVGAYVPGIDVTLTKAKIRGVESFGMLC
SASELEISDEHAGIMELPAAAAVGTPLADLLDIDDPVIDFEVTPNRPDTNGVDGVARDLA
AAGLGKLITPTPVPTDGHFPCPIAIEIDDEEACPAFLGRVIRNVKNGPSPAWLQAQLKAI
GLRPINALVDVTNFLSYDRARPLHVYDTSALMGTVRARRGREGESFLALDGKTYSVDADM
TVIADDEKVLGLGGVMGGEASGCTEETTSVLIESALFDPLITARTGRRTGIVSDARYRFE
RGVDPAGVESGMDLAVQMILEICGGEVSDPLLAGSLETAREAITFPPNEVERLTGLDVTE
GEKEDILLALGFEVSRGGTWEVTPPTWRPDIMGKADLVEEIARIHGFDDLPTLPLPPMPS
KRQLDRPRWLETMARAGFAEAGYLETISWAFCEDQAARLFGGETAPKLSNPISSDLGRMR
PSPLPGLLAAVQRNAAYGAREVRLFEVGAGYPGDAPEDQMLIAAAVQWGAGAKTWQRPPR
EPSVFDAKALALEILGRLGAPVDNLMTFAEGPPHYHPGRKGRLSLGPKTTLAHFGELHPT
VLKALDVSGPVIAVELYPHALPPSKAKGPSRPARQTSKLMPLRRDFAFVVDKAIAADTLL
KAVRGADKALISEVHLFDIYEGDGLPADRKSLAVTVTIQPKEASLDEAAINALSAKIVAQ
AEKAVGATLRG
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcacgctctcctggctcaagcgccatctcgaaaccgacgcctcgattgacgag
attgccgacatgatggtccgtatagggcttgaggtggaggatatctccaatccggccgac
gccctttcggccatgtccgttggtcatatccttcgcgccgagcgtcatcccgatgcggat
aagctccaagtgtgtaccgtggcgacaaaggatggcgagaaacagatcgtctgcggcgcc
ccgaatgcgcgcgctgatctcaaggtcgcctatgcccccgttggcgcctatgtgcctggg
atcgatgtgacccttaccaaggcgaagatccgcggcgtggaaagctttgggatgctgtgc
tctgcatcggagcttgagatcagcgacgagcatgcggggatcatggagctaccggcggcg
gcggctgtcggcacccccctggccgatctcttggacatcgacgatccagtcattgatttc
gaagtgacgccaaaccgtccggacacgaatggtgttgacggggttgcgcgggatctggcc
gcggcggggcttggaaaactgatcacccccacccctgtgcccacggatggacacttcccc
tgtcccatcgccatcgagatcgatgatgaagaggcgtgcccggcctttcttgggcgggtc
atccgtaatgtgaaaaacgggccctctcccgcctggttgcaggcgcaactgaaagcgatt
ggacttcggcccatcaatgcccttgtcgatgtgacgaattttctgtcctacgatcgggcc
cgaccgctccatgtttatgacacctcggcactcatggggaccgtccgtgcccgacgcgga
cgagagggagaaagcttcctcgcgctggatggcaagacctattcggttgatgccgatatg
accgtcattgccgatgacgaaaaggtcttgggtcttggcggcgtgatggggggcgaggcg
agcggctgcactgaggagacgacctctgtcctgatcgaaagcgcgctgttcgatccgctg
atcacggcccgaacagggcgtcggacaggcatcgtctcggatgcgcgttaccggttcgag
cggggtgtcgatcccgccggggtcgaaagcgggatggatctggcggtccagatgatcctt
gagatatgcggcggcgaggtcagtgaccccctattggccggaagtttggagacagcgcgc
gaagccatcacctttccgcccaatgaggttgagcgcctgaccggcctcgatgtgaccgag
ggggagaaggaagacattcttctcgcccttgggttcgaggtgtcgcggggcggcacctgg
gaagtgaccccgccgacctggcggcccgatatcatgggaaaggccgatcttgtcgaggag
attgcccggatccacggctttgacgatctgcccaccctgccgctgcccccgatgcccagc
aagagacagcttgaccgcccgcggtggcttgagactatggcgcgcgcaggctttgccgag
gctggctatctggagaccatcagttgggcgttctgtgaggaccaagccgcgcgcctgttc
ggcggcgagaccgccccaaagctcagcaatcccatctccagcgatctaggccggatgcgc
cccagtccattgcccggtctgcttgccgcggtgcaacgcaacgcggcctatggcgcaagg
gaagttcgtctgttcgaggtcggggcgggttatcctggcgatgcgccggaggatcagatg
ctgatcgctgcggcggtacaatggggcgcaggggccaagacctggcagcgccccccccgc
gagccgtccgtcttcgacgcaaaagcccttgcccttgagatcctcggacggcttggcgcc
cccgtcgacaatctgatgacctttgccgagggtcccccccattatcaccccggacgcaag
gggcgattgtccctcgggcccaaaacgactctcgcccatttcggcgagctgcatccgacg
gtattgaaggcgctggatgtgagcggtccggtcatcgccgtcgaactctatccccacgcc
ctgcccccgtcgaaagcaaaggggccgagccgacctgcacggcaaacctcaaagcttatg
cccttacggcgtgatttcgcctttgtcgtcgataaggccatcgccgccgataccttgttg
aaagctgtgcggggggcggacaaagccttgatcagcgaagttcatctcttcgatatctat
gagggggacggactaccggccgatcgaaaatccctcgccgtgaccgtgacgatccagccg
aaagaggcgtctctcgacgaggcagcgatcaacgccctcagcgcaaaaatcgttgcgcag
gctgaaaaggcggtcggcgcgaccttgcgcggctaa
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