Parvularcula bermudensis: PB2503_04997
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Entry
PB2503_04997 CDS
T01298
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pbr
Parvularcula bermudensis
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbr03016
]
PB2503_04997
Enzymes [BR:
pbr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PB2503_04997
Transfer RNA biogenesis [BR:
pbr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PB2503_04997
Prokaryotic type
PB2503_04997
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ADM09074
UniProt:
E0TFQ9
LinkDB
All DBs
Position
930244..931206
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AA seq
320 aa
AA seq
DB search
MARRRRGQPLHGWLVLDKAYDYGSTEAVSKLRWLFDAQKAGHAGTLDPLATGVLPVAFGE
ATKTVPYIQDGKKTYRFTAKWGEARSTDDREGEVIATSAHRPERSEIEARLCDFEGNIEQ
IPPAFSAVKIDGERAYDLAREGVAVTPPSRMVCIDRLSLLDCPSEDEAVFEAVTGKGTYI
RALVRDLAKALGTVGHVAALRRTAVGPFSEEMAVTMEELTGRPSTDRLTVDDRPAEPAQF
LLPVEAALAEHLSATVDRAQAARLLNGGDAILAAPSMTGLRAGRAGDIEPVMAMEGDKPV
AICRLEGMKLRPVKVFAFRE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcgtcggcggggtcagccccttcatggctggctcgttctcgataaagcatat
gattatggatcgaccgaagccgtctcgaaattgcggtggttgttcgatgcccaaaaggcg
ggacacgccggaaccctcgatcccttggcgaccggggtgttgcccgtcgcttttggggag
gcgacgaaaacggtcccctacatccaggatgggaaaaagacctatcgctttacggcgaaa
tggggcgaggcgcgcagtacggatgatcgtgagggagaggtcatcgccaccagtgcccat
cggcctgaacggtctgagatagaggcccgtctctgcgatttcgaagggaatatcgaacag
atcccccccgccttttcggccgtgaaaatcgacggcgagcgggcctatgatttagcgcgg
gagggggtcgcggtgacgccgccatcgcgcatggtgtgcatcgatcgattgagcttgctt
gattgtccgagcgaagatgaagctgtgttcgaggcggtgacgggaaaaggcacctatatc
cgcgcattggttcgcgacttggcaaaggccctgggaaccgtcggacatgttgccgccttg
cgccgtaccgctgtggggcccttttcggaagagatggcggtgacgatggaggaattgacg
ggccgtccgtcgacggatcgactgactgtcgacgatcgtccggctgagccggcgcaattt
ttattgccggtggaggcagcgctggcggagcatctgtcggcgacggtggaccgggcccag
gcggcgcggctgctcaatggcggtgacgccatcctcgccgccccgtcgatgaccggtctg
cgcgctggccgcgccggtgatatcgaacccgtgatggcgatggaaggcgacaagcccgtc
gcgatctgtcgcctcgaagggatgaagctgcgcccggtcaaggtttttgctttccgcgag
taa
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