Parvularcula bermudensis: PB2503_06362
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Entry
PB2503_06362 CDS
T01298
Name
(GenBank) DNA-directed RNA polymerase subunit N
KO
K03092
RNA polymerase sigma-54 factor
Organism
pbr
Parvularcula bermudensis
Pathway
pbr02020
Two-component system
pbr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PB2503_06362
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PB2503_06362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbr03021
]
PB2503_06362
Transcription machinery [BR:
pbr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PB2503_06362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_PafC
MarR
Sigma70_r4
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ADM09338
UniProt:
E0THP2
LinkDB
All DBs
Position
1235181..1236626
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AA seq
481 aa
AA seq
DB search
MKQSPKLEIRQGQQLIMTPQLQQAIKLLQLTNLELAEFVEEQLEENPFLERDERADIGDA
DREPSASRDEEMARATDHFEAPTQADDTPGEAGAGDWSGVSGRSGIADGEFDAVQNAEVQ
IGLHDHLTHQLHLSTTDEVTLLVGAHLIDLIDDGGYLREETEVIALRLGIDRPFVEKTLS
LIQTFDPSGVGARSLQECLRLQLRDLGELDERISLFIDNLDLLAAHKLPALRRAVRINEE
ELKALIATIRKLDPKPGLAFGGEAVQLVIPDVHVTEASDGGWKVELNAETLPKVIANERY
FSRLSSADNGAETRSFLNEHMATANWLVKSLDQRARTILRVATEIVKYQDEFLVRGIRYL
RPLNLKTIAEKIEMHESTVSRVTSNKYISTPRGTFEMKYFFTPSISSKDGDVAYSAESVR
HRIRELIEAEDPTNPLSDDRLVTLLAGEDFDIARRTVAKYREALGLPSSVKRRRLAQSVL
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcagagcccgaaactggagatccgtcagggccagcaactcatcatgacgccgcaa
ttgcagcaggcgatcaagcttctgcaattgaccaatctcgaactcgccgaatttgttgaa
gaacaattggaggaaaacccgttccttgaacgggacgagcgggccgatatcggcgatgcc
gaccgcgaaccctcagcctcgcgcgatgaagaaatggcgcgggctacggatcatttcgag
gccccgacacaggccgacgacaccccgggtgaggcgggcgcgggggactggtcgggggtt
tccggccgaagcggaatcgctgatggtgaattcgatgcggtgcagaacgccgaggttcag
atcggtctgcatgaccacctcacccatcagcttcacttatcgacgaccgacgaagtcact
cttttggtgggggcccatctgatcgatttaatcgacgatgggggctatctccgcgaagag
accgaggtcatcgccctgcgcctcggcatcgaccgccctttcgtcgagaaaacgctgtcc
ctcatccagaccttcgatccatccggggtcggcgcccgttccctgcaggaatgcttgcgg
ctgcaattgcgcgaccttggggaattggatgagcgcatttcgttgttcattgacaatctc
gacctccttgctgcgcacaaactgcccgctttgcgccgtgccgtgaggatcaacgaagaa
gaactgaaggcgttgatcgccacgatccggaaactcgatccaaagccgggtctggctttt
ggcggggaagccgttcaactggtcatccccgatgtgcatgtgaccgaggccagcgatggg
ggctggaaagtcgagctcaacgcagagactctgcccaaggtgattgccaatgagcggtat
ttctcgcgtctgtcctcggcggataatggcgcggagacccggagctttctgaacgagcat
atggcgaccgccaattggttggtgaagagcctcgatcagcgggcacggacgattttgcgg
gtcgcgacggaaatcgttaaatatcaggacgagtttcttgtgcgggggatacgctatctt
cgtccgctcaatctcaagacgatcgccgagaaaatagaaatgcacgaatcaacggtatct
cgggtgacctcgaataaatatatatcgacgccgcgcggcacgttcgagatgaaatacttc
tttacgccgagtatttcctcgaaagacggtgatgtcgcctattccgctgaaagcgttcgt
catcgaataagggagttgatcgaggcggaggatccgaccaatccgctttctgatgatcgt
ctcgtgaccttgctcgcaggcgaagatttcgacatcgcaaggcgcacggtcgcgaaatat
cgggaggcgctgggcctgccctcatccgtcaagcgacgacgccttgcccaatcggtcctc
cgctga
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