Parvularcula bermudensis: PB2503_07022
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Entry
PB2503_07022 CDS
T01298
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pbr
Parvularcula bermudensis
Pathway
pbr00730
Thiamine metabolism
pbr01100
Metabolic pathways
pbr01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PB2503_07022
Enzymes [BR:
pbr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
PB2503_07022
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ADM09470
UniProt:
E0TE95
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All DBs
Position
1378337..1380244
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AA seq
635 aa
AA seq
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MNKPTSQAEFATPRVTTGPLPASQKVYVQSDRFDDVAAPVRYISVHPSANEPPLPVYDST
GPYTEDGFEAAVEQGLPRKRTAWILERGGVETYEGRQITPEDNGGATGDYLARAFPRAHS
PMREVEGGDGKARLLTQLDYARAGIVTKEMEYIAIRENLGRRQAAAHAAETLADGESFGA
EIPEFVTAEFVRDEVARGRAVIPANINHPEAEPMIIGRNFLVKINANIGNSAVTSSVEEE
VDKMVWATRWGADTVMDLSTGRNIHNTREWIIRNSAVPIGTVPIYQALEKVGGVAEDLTW
EVYRDTLIEQCEQGVDYFTVHAGVRLPFIHLTADRVTGIVSRGGSIMAKWCLAHHKESFL
YTHFEEICEIMRRYDVTFSLGDGLRPGSTADANDRAQFAELETLGELTKIAWRYGVQVMI
EGPGHVAMHKIKANMDKQLKVCGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAM
LCYVTPKEHLGLPDRDDVKTGVITYKLAAHAADLAKGHPAARLRDDALSRARFEFRWEDQ
FNLGLDPETARDFHDQTLPKEAHKTAHFCSMCGPKFCSMKITQDVRDYAGGLSDNERKAL
EEMSEEERRKGMAEMSEKFEEGGGRLYVSAPGAGS
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaataagccgacaagtcaggcggaattcgccacgccgcgggtcacgaccgggcccctc
ccggccagccaaaaggtctatgtgcagagcgatcggttcgatgacgtggccgcgcccgtg
cgctacatctccgtccatccgtcggccaatgagccgcccctccccgtttacgactccacc
ggcccttatacggaggacgggtttgaggcggcggttgagcaggggctgccccggaaacgg
acggcctggattctcgaacgtgggggggtggaaacctatgaaggtcggcagatcacgccg
gaggacaatggcggcgccaccggcgactatctggcgagggcctttcccagggcccattct
cccatgcgtgaggtcgaagggggggatggcaaggcgcgcctcctcacccaactcgactat
gcgcgggcggggattgtcaccaaggagatggaatatatcgccatccgcgaaaatctaggg
cggcggcaggcagcggcacatgccgccgagacgcttgccgatggcgagagctttggcgcg
gagatccccgaatttgtcaccgccgaattcgttcgggatgaggtggcgcgcggccgggcc
gtcataccggccaatatcaaccaccccgaagcggagccgatgatcatcggccggaatttc
cttgtcaaaatcaacgcgaatattggcaattcggcggtcacctcgtcggttgaggaagaa
gtggacaagatggtctgggcgacccgctggggcgccgacacggtgatggatttgtccacc
ggccgcaacattcacaatacacgggaatggatcatccgaaattcggccgtccccatcgga
acggtcccgatctatcaggctctcgaaaaagttggcggggtcgccgaggatctaacctgg
gaggtttatcgcgatacgctgatcgaacaatgtgagcagggggtcgactatttcaccgtc
catgccggggtccgcctgccctttattcatctgacagcggatcgtgtgaccgggatcgtc
tcccgcgggggctcgatcatggcgaaatggtgtctcgctcaccataaggagtcttttctc
tacacccatttcgaagagatctgcgagatcatgcggcgctatgacgtcaccttcagcctg
ggggacggattgcgaccgggttcgaccgccgacgccaatgaccgggcacaatttgcggaa
ctcgaaactctgggcgaattgaccaagatcgcctggcggtacggtgtccaggtgatgatc
gaggggccgggccatgtcgccatgcacaagatcaaggcgaatatggacaagcagctcaag
gtctgcggcgaggcgcctttctataccctgggtcctctgacgacggatattgcgccgggc
tatgatcacatcaccagcgggatcggcgcggccatgatcggctggttcgggacggccatg
ctttgctatgtgacgcctaaggagcatctgggtctccccgatcgtgacgacgtcaagacg
ggcgtcattacctataagctcgcggcccatgcggcggatctcgccaaggggcacccggct
gcaaggttaagggatgatgccctgtcgcgggcgcgctttgagttccggtgggaagatcaa
ttcaatctggggctcgatccagagaccgcgcgggacttccatgatcagaccctccctaag
gaagcccacaagaccgcccatttttgttcgatgtgtggaccgaaattctgttcgatgaaa
atcacccaggatgtccgtgactatgccgggggtctttcggacaatgagcgcaaggccctt
gaggagatgagcgaggaggaacgccgtaagggcatggccgagatgtcggagaaattcgag
gaggggggcggccgcctctatgtctcagcgccgggggccggcagctga
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