Parvularcula bermudensis: PB2503_08349
Help
Entry
PB2503_08349 CDS
T01298
Name
(GenBank) possible uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pbr
Parvularcula bermudensis
Pathway
pbr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PB2503_08349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbr03400
]
PB2503_08349
Enzymes [BR:
pbr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PB2503_08349
DNA repair and recombination proteins [BR:
pbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PB2503_08349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADM09725
UniProt:
E0TB50
LinkDB
All DBs
Position
complement(1653734..1654354)
Genome browser
AA seq
206 aa
AA seq
DB search
MVAYREENAAAHPDWYNGAVSSFCPKGGASSVSLLIVGLAPGVQGANRTGRPFTGDYAGD
LLYQTLGSFGWATGPYDKRPDDGLELTGAMITNAVRCVPPQNKPTAAEINRCRPFLRSRI
SSLPRLDVILSLGKIAHDSVVRTLGLKLKDHPFGHNVHYAVTAEGGRPLALAASYHCSRY
NTNTGRLTEEMFADVFRQIAKRVDRQ
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgcctatcgcgaggagaatgcggcggcccaccccgattggtataatggcgccgtc
tcctccttttgcccaaaggggggggcgtcatccgtcagtctattgattgtcggcctggcg
ccgggggtgcagggggcgaaccggaccggacggccctttaccggcgattatgcgggcgac
ctcctctatcagacattgggcagctttggctgggcgaccggcccttatgacaagcgtccc
gatgacggacttgagttgaccggcgccatgattaccaatgccgttcgatgcgtcccgcca
cagaacaagccgaccgcggcggagatcaatcgctgtcgcccatttctcagatcccggatc
tcctcacttccccggctcgacgtgattttgagcctcggcaagattgcccacgattcagtc
gttcgcaccctgggcctgaagctgaaggatcatcccttcggccacaatgtccactatgcg
gtcaccgcggagggggggcgcccccttgcccttgccgccagttatcattgctcacgctac
aatacgaataccggccgactgaccgaagagatgtttgcggatgtcttccgccaaatcgcc
aagagggtagaccgtcagtaa
DBGET
integrated database retrieval system
