Parvularcula bermudensis: PB2503_08879
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Entry
PB2503_08879 CDS
T01298
Name
(GenBank) methyl-accepting chemotaxis protein McpD
Organism
pbr
Parvularcula bermudensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
PAS_4
PAS_9
HAMP
dCache_1
PAS
PAS_3
PAS_8
HAMP_2
Laminin_II
BLOC1_2
CorA
DUF948
GCN5L1
Motif
Other DBs
NCBI-ProteinID:
ADM09831
UniProt:
E0TCE1
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Position
1770514..1773534
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AA seq
1006 aa
AA seq
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MLIGGACLVTAGFAGVVSYLSAKHSLIEAAELKLTTALDDRAGALDSVFETIKGDLEIQA
AHPLVKQAIVDFTAAYDALGPGAQSYLQSAYIHDNPFPLGEKDSLMAADDGSRYSDLHEA
YHPVFRQLLQEREYYDIFLFDKEGELVYTVFKKLDYATNLVNGEYAETDLGNAFRAARDT
RSLSFFDFAPYAPSAGAPASFMSAPVTDDAGQFLGVIAFQMPIHGLNALMTTTYGLGETG
QTLAVGSDYLLRSQSRFAEDNTILVEKLQSPAIEKALNGESGVSTYTDREGRALVQAFKP
VTIVDTQWALVAQQAKDELLARAYALRNRLMIEISLLALAFLGLAIWISQGISFPLRNMK
DHLDRMTKGDYKGQVPCRDQGDEIGEIARTMAVLTETLEEGAKDSATAAFKGSAFDNAGS
AIVVIDRKQTIVFANRAATTFFAKNETALRDAYGAFNVDKPVGSQLPFTKDENVVSFSTL
SNERQLPVEVYAELGDRVFRLNISAVVDGKGTLIGNAVEMKDVTVSRANAAILGAVEAEQ
ATITFTPDGKILGANENFLGAVGYSLEEIKGKHHSMFVPDEMRKTDEYRRHWPQLASGAS
ISGIFERVRASGERIYIQGIYAPVRDHKGNVTKVVKIVNDVTESERARRQAAIRDEKVSR
DQRKVVEALKEGLSRLSAGDLTAKITEEFPDEYVEILENYNLAIEKLNATLSDIVVNSRS
IDQSTQEVNQAADDLSKRTESQAASLEETAAALDEAVKSVADTAETAGQANQIVEKTSND
ARNGGEIVKNAVHKMGEIEASSSEISQIIGVIDEIAFQTNLLALNAGVEAARAGEAGRGF
AVVASEVRSLAQRSSDAAKEIKDLITTSSRHVSDGVSLVGQAGEALGRIVEGVSDVTAMV
TKISAAAKEQSRGLAEINTAVGQMDEVTQQNASMVEETTAASHQLRQMASSLASSLAAFN
TSASSGASGPSSSAAPVVRSQIKRAVSYAAEGNTAVASGGDGWDDF
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcgggggcgcctgtctcgtgacagccggtttcgcaggcgttgtcagctatctg
tcagcgaaacatagtttgatagaggccgctgagttaaaactcaccacagctttggatgat
cgcgccggcgcactcgattccgtctttgaaacgatcaaaggcgaccttgagatccaagcg
gcacatccgctcgttaagcaggcgatcgtcgacttcaccgcagcctatgatgcgctcggg
ccgggggcgcaatcctatcttcagtccgcctatattcatgacaatcccttcccgctgggg
gagaaagacagtttgatggctgccgatgatggcagtcgttatagtgaccttcacgaggcg
tatcacccggtcttccggcaacttctgcaagagcgggagtattacgacatcttcctcttc
gataaggagggggagcttgtctatacggtcttcaagaaactcgactacgccaccaacctc
gtcaacggcgaatatgccgagaccgatctgggcaacgccttccgcgccgcgcgggatacg
cgatcgctctcgttcttcgatttcgctccctacgcgcccagtgcaggggcgccggccagt
ttcatgtccgcgccggtcacggacgatgcaggtcaatttctcggcgtcatcgcctttcaa
atgccgatccacgggcttaacgccctgatgacgacgacctacggactgggggagaccggt
cagaccttggcggtggggtccgattatctgcttcgcagccagtcacggtttgccgaagac
aatacaatcctcgtagagaagttacagtctccagccattgagaaggccttgaacggggaa
agcggcgtttcaacgtatacagatcgagaaggccgggcgctggtccaagcgttcaagccg
gtcacgatcgtggacacgcaatgggcgctggtcgcgcagcaggccaaagacgagctcctg
gcccgcgcttacgctttgcgcaatcgcctaatgatcgagatcagtctcctggctttggcc
tttttgggtctggctatctggatcagccaaggtatttcgttccccctacggaatatgaag
gatcatctcgatcgcatgacgaagggcgactataaggggcaggtgccgtgccgtgatcag
ggagatgaaatcggcgagattgcgcggaccatggctgtccttaccgaaaccctggaggag
ggggcaaaagacagcgcgacggcggcgttcaagggatcggccttcgacaatgcgggcagc
gccatcgttgtgatcgatcggaagcagaccattgtgttcgccaatcgcgcggccacgacc
ttttttgcaaagaacgaaacggctctgcgcgacgcatatggcgcttttaacgtcgacaag
ccggtaggcagccaactgcccttcacgaaagatgaaaacgtcgtctccttttccactctg
tccaacgaacggcaattgcccgtcgaagtctatgctgaattgggcgatagggtatttcgc
ctcaacatcagtgcggtggtcgatggcaaggggacgctgatcggcaatgcggtggagatg
aaagacgtcaccgtttccagggccaatgccgctatcttgggggccgtggaggcggagcag
gcgacgatcacctttaccccagatggaaaaattctcggtgcaaacgaaaatttcctcggt
gcggttggctacagcctggaggagatcaagggtaagcatcactcgatgtttgtccctgat
gaaatgcggaaaacggacgaatatcgtcgccattggcctcaacttgcgagcggcgcgagc
attagtggcatcttcgagcgggtccgtgcatcgggtgagcggatctatatccaagggatt
tatgcgccagtccgcgaccacaaggggaacgtcaccaaggtcgtaaagatcgtcaacgat
gtcaccgaatcggagcgggcccgccgtcaggctgccatacgggacgagaaagtgtcccgc
gaccagagaaaggtcgtcgaggcgctgaaagagggtctcagccgcctcagcgcgggagac
ctgaccgcaaagattacggaggaattcccggacgaatacgtcgagattctcgagaactat
aatctggcgatcgaaaaactgaatgcgacattgtcagacatcgtcgtcaattcgcgctcg
atcgatcagagtacgcaggaggtcaaccaagcggccgatgatctgtccaagcggacggaa
agccaggcggcttccctcgaagaaacggcggcggcgcttgatgaggcggtgaagtcggtg
gcggacacggcggagacagccggccaagccaatcagattgtcgagaaaacaagcaatgac
gcccgcaacggtggcgagattgtgaagaatgccgtccataaaatgggcgagatcgaagcg
tcttcttcggaaatctcccagatcatcggtgtcatcgacgaaatcgccttccagaccaat
ctgcttgccctcaatgcaggggtcgaggcggcaagggccggtgaagctggacgcggcttt
gcggtggtggcttctgaggtgcggtccctggcgcagcggtcttcggatgcggcgaaggaa
atcaaagatctcattaccacctcctcgcgtcatgtttccgatggggtcagtctggtcggt
caggccggtgaggcgcttggtcgcatcgtcgaaggggtgagcgacgtgacggccatggtg
acgaagatcagtgctgcggcgaaagagcagtcccgtggtcttgcggaaatcaacacggcc
gtgggacagatggacgaggtcacccaacaaaacgcgtcgatggtcgaggaaaccacggcc
gccagtcaccaattgcggcagatggcgtcctcactggcgtcctcgctggcggcgttcaat
accagcgcttcctccggcgcgtcggggccctcttcgtctgccgccccggtggtcaggtcg
caaatcaagcgggccgtctcctacgccgctgaaggcaatacggctgtggcaagcgggggg
gacggctgggacgatttttga
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