Parvularcula bermudensis: PB2503_08934
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Entry
PB2503_08934 CDS
T01298
Name
(GenBank) 2-oxoglutarate dehydrogenase, E3 component, lipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pbr
Parvularcula bermudensis
Pathway
pbr00010
Glycolysis / Gluconeogenesis
pbr00020
Citrate cycle (TCA cycle)
pbr00260
Glycine, serine and threonine metabolism
pbr00280
Valine, leucine and isoleucine degradation
pbr00310
Lysine degradation
pbr00380
Tryptophan metabolism
pbr00620
Pyruvate metabolism
pbr00630
Glyoxylate and dicarboxylate metabolism
pbr00640
Propanoate metabolism
pbr00670
One carbon pool by folate
pbr00785
Lipoic acid metabolism
pbr01100
Metabolic pathways
pbr01110
Biosynthesis of secondary metabolites
pbr01120
Microbial metabolism in diverse environments
pbr01200
Carbon metabolism
pbr01210
2-Oxocarboxylic acid metabolism
pbr01240
Biosynthesis of cofactors
Module
pbr_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
pbr_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
PB2503_08934
00020 Citrate cycle (TCA cycle)
PB2503_08934
00620 Pyruvate metabolism
PB2503_08934
00630 Glyoxylate and dicarboxylate metabolism
PB2503_08934
00640 Propanoate metabolism
PB2503_08934
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PB2503_08934
00280 Valine, leucine and isoleucine degradation
PB2503_08934
00310 Lysine degradation
PB2503_08934
00380 Tryptophan metabolism
PB2503_08934
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PB2503_08934
00670 One carbon pool by folate
PB2503_08934
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pbr04147
]
PB2503_08934
Enzymes [BR:
pbr01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
PB2503_08934
Exosome [BR:
pbr04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
PB2503_08934
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
DAO
FAD_binding_2
FAD_oxidored
GIDA
AlaDh_PNT_C
HI0933_like
NAD_binding_8
FAD_binding_3
Lys_Orn_oxgnase
Thi4
Lycopene_cycl
UDPG_MGDP_dh_N
Amino_oxidase
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
ADM09840
UniProt:
E0TCF0
LinkDB
All DBs
Position
1779059..1780471
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AA seq
470 aa
AA seq
DB search
MSQSFDVVVIGGGPGGYNAAIRAAQLGLSVACIEKRPSGRFGGTCLNVGCIPSKAMLHAS
EAYAHAKSHLKELGVKVSGVELDLPAMLGQKDDAVQGLTDGIAYLFKKNKVTGLKGHGRI
EGPGKVILTDEDGKEEPLSASTIVIATGSSVMSLPNVEIDEDVIVSSTGALELKKVPDHM
VVVGGGYIGLEMGSVWRRLGAKVTVVEYLDRITPGMDGEVSKQFMRILKKQGMEFKLGTK
VTGIEKTKQGATLSLEPAAGGEKETLEADVVLIAIGRKPHTEGLGLDTVGIKTNDRGFIP
VDDHYQTGVDGIYAIGDVTPGPMLAHKAEDEAVAVAEIIAGKGGHVNYDVIPGVVYTDPE
VAMVGKTEEQLKDEGVAYKVGKFPFTANSRAKTNHETDGFVKVLADAETDKVLGVHMIGT
GVGEMIAEACLVMEFGGSSEDIARTCHPHPTRTEALRQAAMGVEGWTMQA
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagtccttcgacgtcgtagtcattggggggggacctggcgggtataatgccgcc
atacgggccgcgcagttgggcctctcggtggcgtgtatcgaaaagcgccccagcgggcgg
ttcggcggcacttgcctcaatgtcggctgtattccttcaaaagcgatgctccatgcttcc
gaggcctacgctcatgcgaaatcccatctgaaggagttgggcgtcaaggtctccggcgtg
gaactcgatcttcccgccatgctcggccaaaaggatgacgcggttcaggggcttacggac
gggatcgcgtatctcttcaaaaagaacaaagtcacgggccttaaggggcatgggcggatc
gaaggccctggcaaggtcattttgaccgacgaggacggtaaggaagaaccgctgagcgcc
tcgacgatcgtcatcgccaccggctcgtcggtcatgtcactgccgaatgtcgagatcgac
gaagacgtgatcgtctcctctaccggggcccttgagttgaaaaaggtgcccgaccacatg
gtcgtggtggggggcggctatatcgggcttgaaatgggctcggtgtggcgccgccttggg
gccaaggtgaccgtggtcgaatatctcgaccgcatcacgccgggtatggacggtgaagtt
tccaaacaattcatgcgtatcctgaagaaacagggaatggaattcaagctcggcacgaag
gtgacggggatcgagaaaacaaagcaaggggccaccctgtccctggaacccgccgccggc
ggggaaaaagagaccttggaagccgatgtcgtcctgattgcgattgggcggaagccgcat
actgaagggttggggctcgacactgtcggcatcaagaccaatgaccgggggttcattccg
gtggacgatcattaccagaccggtgtcgatggcatctatgccatcggcgatgtcaccccc
ggtccgatgctggcccacaaggctgaggacgaagccgtcgcggtggccgaaatcatcgcc
ggcaaaggcggtcacgtgaattacgatgtgatccccggcgtggtctataccgatcccgaa
gtcgccatggtcggcaagaccgaggagcaattgaaggatgagggggtcgcctacaaggtg
gggaaattcccctttaccgcgaatagtcgggccaagacgaatcacgaaacggacggcttt
gtgaaagtgctggcggatgccgaaaccgacaaggttctcggtgttcatatgatcggcacc
ggggtcggcgaaatgatcgccgaagcctgtcttgtgatggagttcggcggctcttcggag
gatatcgcccgcacctgccatcctcatccgacccgtaccgaagcgctgcgtcaggcggcg
atgggggtcgagggctggacgatgcaagcctag
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