Parvularcula bermudensis: PB2503_09209
Help
Entry
PB2503_09209 CDS
T01298
Name
(GenBank) blue light photoreceptor cryptochrome
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pbr
Parvularcula bermudensis
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbr03400
]
PB2503_09209
Enzymes [BR:
pbr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PB2503_09209
DNA repair and recombination proteins [BR:
pbr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PB2503_09209
Prokaryotic type
PB2503_09209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Ntox37
Motif
Other DBs
NCBI-ProteinID:
ADM09895
UniProt:
E0TD72
LinkDB
All DBs
Position
complement(1844453..1845889)
Genome browser
AA seq
478 aa
AA seq
DB search
MTDPVILWLREDLRFDDNPAMREAAASGAPVLCLYVLDDATAGDFAMGAAQRWWLHHSLC
AFKEDLETRGGALILRRGKETEIVPALAKEIKASHVFWNRRYMKWQTDPDTEIKSALQDM
GIKGISCNGRLLYEPWEIETKSGDPYKVYTPYWKSLQQKEGPRAALPRTDKLNAPPSLPS
TDRLDDWNLLPRSPNWAEGFEPVWTPGEKGARARLRAWLDTDAASYDDCRNRPDQDRTSR
LSPHLHFGEISPVVLWHSVSDAMEAGDIPKDQGTSFLSEIAWREFSYQLLYYHPTMRDQP
LMEKFTDFEWDTDKKALNAWQRGRTGYPIVDAGMRQLWTEGWMHNRVRMIVGSFLVKDLL
LDWRDGMRWFWDCLVDADPANNTASWQWIAGCGADAAPFFRIFNPTTQSEKFDPDGAYIR
RYVPELRDLPTRFIHEPRKASTAILKDAGIVLGETYPDPIVDHSDRRKQALSRYEAIK
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcccgtcatcctgtggctacgcgaagatctgcgcttcgacgacaaccccgcc
atgcgcgaggcggcggcatccggcgcccccgtcctctgtctctatgtactggacgacgcc
accgccggcgattttgccatgggggccgcccagcgatggtggctgcatcattcgctttgc
gcctttaaggaggatcttgagacccgggggggtgccctcatcctcaggcgcggtaaggag
accgagattgtccctgctctcgcaaaagagatcaaggcaagccacgtcttctggaaccgc
cgctacatgaaatggcaaaccgatcctgatacggagatcaaatccgcccttcaggatatg
gggataaaaggcataagctgtaacggccgccttctctatgaaccctgggagatcgaaaca
aaaagcggcgatccgtataaagtttatacgccctattggaaaagtctccagcaaaaggag
gggccgagggctgccctgccaaggacggataagctgaacgccccaccatctcttccgtcg
acagatcgcctcgacgattggaacctcttgccccggtcccccaattgggcggaaggattt
gagcccgtctggaccccaggggaaaaaggcgcccgtgcacgactgcgcgcatggctcgac
acggatgcggcatcctatgatgactgccgcaatcgacccgaccaggaccgcacgtctcgg
ctttcccctcaccttcatttcggtgaaatcagccctgtggtgctctggcacagtgtctca
gatgccatggaggcaggcgatatccccaaagatcagggaacgtcgttcctgtcagaaatc
gcgtggcgcgaattcagctatcaacttctctattaccatcccaccatgcgcgaccagccg
ctgatggaaaagttcaccgatttcgagtgggacacagacaagaaggccctcaacgcctgg
cagcgaggacgaacggggtaccccatcgtcgatgcgggcatgcggcaattatggactgaa
ggctggatgcataatcgggtgcggatgatcgttgggagtttccttgtgaaggacctgctg
ctcgattggcgggatgggatgaggtggttctgggactgccttgtcgatgcggaccccgcg
aacaacaccgcctcatggcagtggatcgccggatgcggcgcggacgccgcccccttcttc
cgaatcttcaatcccacgactcaaagtgaaaagttcgacccggatggcgcctatattcgc
cgctatgtgccggaattgagggatcttccgacgagattcatccatgagccccgtaaggcg
tctaccgctattttgaaggatgccggtatcgttctcggcgagacctatcctgaccccatc
gtcgaccatagcgaccgccgaaagcaggctttgtcgcgctatgaagcgatcaaatag
DBGET
integrated database retrieval system
