Parvularcula bermudensis: PB2503_09924
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Entry
PB2503_09924 CDS
T01298
Name
(GenBank) aminotransferase, class V
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
pbr
Parvularcula bermudensis
Pathway
pbr00450
Selenocompound metabolism
pbr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
PB2503_09924
Enzymes [BR:
pbr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
PB2503_09924
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
PB2503_09924
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Imm48
Motif
Other DBs
NCBI-ProteinID:
ADM10037
UniProt:
E0TEF1
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All DBs
Position
1981356..1982579
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AA seq
407 aa
AA seq
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MTDFDVDRFRQQFPILSRDIGKSPLAYLDNAASVQKPQAVIDAMATAMATSYANVHRGLH
TLANETTAAFEEARTIAANYLGAASQDEIVFCSGGTDAINLVANSLGQDHIGEGDEIILS
VMEHHSNIVPWHFLRERKGVVLKWLDVDENGHIDIEAYKANLSPRTKLVAITGQSNVLGA
FPDVRTMADLAHDVGALLLVDGCQHAVHGPVDVQALNCDFYVLTGHKTYGPTGIGVLYGR
QSVLEGMPPFRGGGEMIDRVDLDGVTYNEPPHRFEAGTPPILEAIGLGAALSWVMEQDHE
GLRSHERALTDHAMEALRSTNIVTLYGASPEKGPIVAFNLKGAHPHDVATLLDNKGVAVR
AGHHCCQPLMARLGVTATARASFAPYNTHDEVDALVDACVKAHNLLN
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgacggatttcgacgttgatcgcttccggcaacaatttccgatcctctctcgcgatatc
ggaaagtcgcccttggcctatctcgataatgcggcctcggtgcaaaagcctcaggcggtg
atcgacgccatggctacggccatggccacctcctacgccaatgtccatcgcggccttcac
actttggccaatgagaccaccgcggcctttgaggaggcacggaccatcgccgccaattat
ctgggggcggccagtcaggacgagatcgttttttgctccggcggtaccgatgcgatcaat
ctggtcgcgaatagtcttggtcaggatcatatcggtgagggcgatgaaatcatcctcagc
gttatggaacatcactcgaatatcgttccctggcattttctgagagagcggaagggcgtg
gtcctcaaatggctcgatgtcgatgagaacggtcatatcgatatcgaagcctataaggcg
aacctgtccccacgcaccaaattggtggcgataacgggtcagtcgaacgtgctgggcgcc
ttcccggatgtcaggaccatggccgatcttgcgcatgatgtcggcgccctgctcctcgtc
gatgggtgccagcatgccgtccacggaccggtcgatgttcaggccctcaattgcgatttt
tacgtccttacggggcataagacctatggccccacgggcatcggggttctctatgggcgt
cagtcggtgctggaggggatgccgcccttccggggcggcggggaaatgattgaccgcgtg
gatcttgacggcgtcacctataatgagccgccgcaccgttttgaggcggggacaccgccc
attctcgaagcgatcggcctcggggcggcgctgtcctgggtcatggagcaggatcacgag
gggctgcgcagccatgagcgggccctcaccgatcacgcgatggaggccctgcggagcacc
aatattgtcacgctctatggcgcctcgcccgagaagggcccgatcgtcgcgttcaatctc
aaaggggcccacccccatgatgtggcgacccttctggacaataagggcgtggctgtcagg
gctgggcaccattgttgtcagccgctgatggctcgccttggcgtgaccgccacggcccgg
gccagtttcgccccctataatacccatgacgaagtcgatgcgctggttgacgcctgcgta
aaggctcacaacctattgaattga
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