Parvularcula bermudensis: PB2503_10024
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Entry
PB2503_10024 CDS
T01298
Name
(GenBank) hypothetical protein
KO
K18988
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:
3.4.16.4
3.4.21.-]
Organism
pbr
Parvularcula bermudensis
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pbr01002
]
PB2503_10024
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbr01011
]
PB2503_10024
Enzymes [BR:
pbr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PB2503_10024
Peptidases and inhibitors [BR:
pbr01002
]
Serine peptidases
Family S12: D-Ala-D-Ala carboxypeptidase B family
PB2503_10024
Peptidoglycan biosynthesis and degradation proteins [BR:
pbr01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
PB2503_10024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
ADM10057
UniProt:
E0TEW4
LinkDB
All DBs
Position
2001309..2002427
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AA seq
372 aa
AA seq
DB search
MGTPTASGADPDGPSDDTPSPDPEPAPQPSPEPAPLEAAENEDLFAPIIAAIEASPVENL
LVVFGDEDERLFAYEKGHFPEQETYLTASAAKLLSGATFFRLIEDGVMRLDDRPSAYFDY
WTTDPADPRSEITLAHLLGFVSGFHSNPLLSPGCANNPLMTLQECAQKYYEDGLNGDPGG
VFDYGPSHFQIAAAMAEQAMGLPYTEIFETVTAAAIGMTDTEFKSPSRQNPKAAGGATSS
PVDYEKFLQALLSERFLPNLSAFAEDRTPNARFRGRPKVKSIEGSDWHYSSGAWLECDAP
RFTKACAEEAVISSPGAFGWTPWIDLAHGYYGMVAMEEFGVFEQEIGEEGVRLEQELQPL
IERALEELRARR
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
gtggggacgccgaccgcctcgggggccgaccccgacggtcccagcgacgacacgccgagc
cccgatcccgagccggcccctcaaccttctcctgaaccggctccccttgaggcggcggag
aacgaagatctcttcgcgcccatcatcgccgccattgaggcgtcgcccgtggaaaatctg
ctggtggttttcggcgatgaggatgagcgcctttttgcctatgagaaggggcatttcccg
gagcaggaaacctatctcacggcgtcagccgcgaaattgttatcgggggcgacctttttc
cggctgatcgaggacggcgtgatgcgcctcgacgatcggccaagcgcgtatttcgattat
tggaccaccgatccagcggacccgcggagcgagatcacactcgcccatcttctgggcttt
gtctccggcttccacagcaatcctttgctctcaccgggatgcgcgaacaatccactgatg
accctccaggaatgcgcgcaaaaatactacgaagacgggctgaacggggatccaggcggg
gtgttcgactacgggccttctcacttccagattgcggcggccatggccgaacaggcgatg
ggtctgccctataccgagatattcgaaacggtcaccgccgccgcgatcggtatgaccgat
acagagttcaaatcgccgagccggcaaaacccgaaggccgccggcggcgccacgtcgagc
ccggtggattacgagaaattcctgcaagcgcttctgtcagagcggttcttgcccaatctc
tccgcttttgccgaagaccggaccccgaatgcccgttttcggggacgcccgaaggtcaag
agcatcgagggatcggattggcactattccagcggggcatggcttgaatgcgatgctccc
cgcttcacgaaagcgtgtgccgaagaggccgtgatctcaagcccaggggcctttggctgg
accccgtggatcgatcttgcccacggctattacggcatggtggcgatggaggaattcggg
gttttcgagcaagagattggcgaggagggcgtccgcctcgagcaggaattgcaacccctg
atcgagcgcgccctcgaagagctccgggcgcggcgctaa
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