Parvularcula bermudensis: PB2503_10029
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Entry
PB2503_10029 CDS
T01298
Name
(GenBank) Beta-lactamase
KO
K18988
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:
3.4.16.4
3.4.21.-]
Organism
pbr
Parvularcula bermudensis
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pbr01002
]
PB2503_10029
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbr01011
]
PB2503_10029
Enzymes [BR:
pbr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PB2503_10029
Peptidases and inhibitors [BR:
pbr01002
]
Serine peptidases
Family S12: D-Ala-D-Ala carboxypeptidase B family
PB2503_10029
Peptidoglycan biosynthesis and degradation proteins [BR:
pbr01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
PB2503_10029
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Beta-lactamase
Trypan_PARP
Motif
Other DBs
NCBI-ProteinID:
ADM10058
UniProt:
E0TEW5
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All DBs
Position
2002574..2003887
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AA seq
437 aa
AA seq
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MRGLRLLLVVMAIGTFLGGCSESGSRLQDMVDPGTPPDPDPDPDPDPDPGPEPQPIDVLF
APVVEAADASVVDNLLIIIGDRDGRLFAYEKGVFPEEEAILTASAAKILSGATLYRLVED
GVLSLDDQPQDYLDFWTDDPADVRSRITLRHLLGFTSGFDATPVLSPGCVSNPFITLQEC
AKRYHDEGVEAEPGEIFYYGPAHLQIAAAMAEVATGLPYTEIFETVTAAPLGMTDTEFQS
PSRTNPRAAGGAVSSPNDYEKLLRALLAEQFLPDLEAFAVDRTADVIFGSRPQVTGITGT
DWHYATGVWIECDTPRFSDACLDQPTISSPGAFGWTPWIDMANDYYAMVAMREFAFLDQV
IAEEGVRLEQELQPLIETALRSLRAQGGAVAFAPRRQLDLDLCRGGDTWQIMAPRPDGKR
AYGDPPRQAQCAQDAVR
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgggctcaggttgctcctggtcgtgatggccattgggacttttttgggggggtgc
agcgaaagcggatcccgcttgcaggacatggtcgatccggggacacctcctgatcctgat
cctgatcctgatcctgatcccgacccaggtcctgagcctcaaccgatcgatgttctgttc
gcgccggtggtcgaggccgccgatgcctccgtcgtcgataatttgctgatcattatcggg
gaccgggatggccgcctcttcgcctatgagaaaggggtttttcctgaggaggaagcgatt
ctcaccgcatcggcggcgaaaatattgtccggcgccaccctttatcggttggttgaggat
ggggtcctctccctcgacgatcagccgcaggattatcttgatttctggactgacgaccct
gcggacgtccgcagccggatcaccttgcggcacctccttggtttcacttcagggtttgat
gcgacccccgtcctgtcccctggatgcgtcagcaatccttttatcaccttgcaggagtgt
gcgaagcgctatcacgacgagggggtggaagcggaacccggcgagattttctattacggg
ccggcccatctccagatcgcggcggccatggccgaggtggcgacagggctcccctatacc
gaaatctttgaaaccgtcacggctgcgccactggggatgacggatacggaatttcaatcc
cccagccgcaccaatccgcgggctgcggggggcgctgtctcatcacccaatgactatgag
aaacttctccgcgctctgctggcggagcagttcttacccgatcttgaggcgtttgccgtg
gacaggaccgccgatgtgatctttggcagccgcccccaggtcaccgggattacggggacg
gattggcactatgcgaccggcgtttggatcgaatgcgatacgccccgcttcagcgacgct
tgtcttgatcagccgacgatttcgagccccggcgcctttggatggacgccgtggatcgat
atggccaatgactattacgccatggtggcgatgcgagaatttgcctttctcgatcaggtg
atcgcagaggagggggtccgccttgaacaggagctgcaaccgttgatcgaaacggccctg
cggagtttgagggctcaagggggggcggtcgccttcgccccccggcgacagcttgacctg
gacttgtgtcgcgggggagacacatggcagatcatggcgccccggccagacggaaagcgt
gcatacggtgatcccccaagacaagctcaatgcgctcaagacgcggttcgctga
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