Parvularcula bermudensis: PB2503_10234
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Entry
PB2503_10234 CDS
T01298
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pbr
Parvularcula bermudensis
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbr03032
]
PB2503_10234
03400 DNA repair and recombination proteins [BR:
pbr03400
]
PB2503_10234
Enzymes [BR:
pbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PB2503_10234
DNA replication proteins [BR:
pbr03032
]
Prokaryotic type
DNA Topoisomerases
PB2503_10234
DNA repair and recombination proteins [BR:
pbr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PB2503_10234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ADM10098
UniProt:
E0TFH4
LinkDB
All DBs
Position
2042706..2045480
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AA seq
924 aa
AA seq
DB search
MADSKDEHTENIPPQGAGSGDGEEGIAPISITEEMQKSYLDYAMSVIVSRAIPDARDGLK
PVHRRILWSMQEQGYTHDKRHRKSANVVGDVIGKYHPHGDTAVYDALVRMAQHFSMRLPL
LDGQGNFGSIDNDPPAAMRYTEVRMAAPAEALLADIDKDTVDFHETYDGERQEPGVLPAR
FPNLLVNGAGGIAVGMATNIPPHNLGEIIDATVRLIDEPHVSDEELLSIVPGPDFPTGAS
IMGQSGARQALLTGRGSVVMRATTAVEEVRKDRFAIIVSDIPFQVNKAAMVERIAGLVRE
KKLEGIADLRDESDRHGIRVVIELKRDANAEVVLNNLYKQSPLQTSFAYNLLALNRGRPE
QMTLRTVLKSFVDFREEVVTRRTKHLLMKARDRAHVLVGLAISVANIDEVVRLIREAPNP
AAAREALMGRNWPAKDLASLVALVADPRHSLQEDGSLRLSETQARAILDLRLQRLTALGR
DEIGDELQSLADKIADYLQILRDRDRVLTIIKDELADVRERFATPRKTQFIDAIEMEDED
LIAREDMVVTVSHAGYVKRTSLDTYRAQRRGGKGRSGMAMKDDDFISQLFVGNTHTPLLF
FTDRGMAYKLKLWRLPEGGPTSRGKAFINLLPLDQGERVTNILPLPDDEAQWADMDIVFA
TRSGNVRRNKLSDFTNVNKAGKIAMKLDEGDALVGVGIARESEDILLTTRNGMTIRFPVD
AVRVFSGRTSTGVRGIRFKPNDEFGEDGVMSMAILRHLDVSSEEAKAYLKHAAAMRRAAG
EGETEGSDAEAEGSEAALSTERLAAMQAAEQFILTATENGYGKRTSSFEYRTSGRGGQGI
AGIVTSARNGRVVASFPVEDADEIMLVTDGGQLIRTGVADIRVAGRNTQGVKILTTRETE
RVVSVEHVPEAQNDDDLPDDETEM
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
gtggccgactcaaaagacgaacataccgagaatattcccccccaaggcgcaggatccggt
gacggggaggaggggatcgccccgatttcgatcaccgaagagatgcaaaagtcctatctg
gactacgccatgtccgtcatcgtgagccgcgcgattcccgatgcgcgggatggcctgaag
cccgttcaccggcggattttgtggtccatgcaggagcaggggtacacccatgacaagcgg
catcggaaatcggccaatgtcgtaggggacgtcatcgggaaatatcacccgcacggtgat
accgccgtctacgacgcattggtccgcatggcgcaacatttttcgatgcggctgccgctg
cttgatggccaggggaatttcgggtccatcgacaacgaccctcccgccgccatgcggtat
actgaggttcgaatggcggcgccggcggaggcgctgctcgccgatatcgacaaggatacg
gttgatttccacgagacctatgacggggaacggcaggagccgggggtcttgcccgcacgg
tttccgaacctgttggtcaacggcgccggcggtattgccgtcgggatggcaacgaacatc
ccgccgcataaccttggagagatcatcgatgcgacggtccggttgattgatgagccccat
gtgtcggacgaggagctgctctcgatcgtgccggggccggacttccccacaggggcgtcg
atcatggggcaatcgggtgcccgtcaggcgttgctcaccgggcgggggtccgtcgtcatg
cgggcgaccaccgcggtcgaggaggtccgtaaggaccgctttgccatcatcgtttccgac
atcccctttcaagtgaacaaagcggccatggtcgagcggatcgcggggcttgtgcgtgag
aagaaactcgaaggcatcgctgatttacgagatgaaagcgatcggcatgggatcagggtc
gttatcgagctgaagcgcgatgccaatgccgaggtcgtgctcaacaacctctataagcaa
agcccgcttcagacgtccttcgcctataaccttctcgccctcaatcgggggcgaccggag
caaatgactcttcggaccgtcctcaagagctttgtggatttccgagaagaagtcgtcacg
cggcggacgaagcacctgttgatgaaggcgcgagatcgcgcccatgtcctggtcggactg
gccatctccgtggccaatatagatgaggtcgttcggttgatccgagaggcgcccaatccc
gccgccgcgcgggaggcgttaatgggccgaaattggcccgccaaggatctagcgtcgctg
gtggccctcgtcgccgacccgcgccatagcctgcaggaggacggcagcctccgcctgtcc
gaaacccaggcccgcgctatcctcgatttgcggctccaacgactgaccgccctggggcgc
gatgagatcggcgatgaactgcaaagcctcgccgataaaatcgctgactatcttcaaatt
ttgcgtgatcgtgatcgcgtactgacgatcatcaaagacgagctggccgatgtgcgggag
cgcttcgcaacgccgcgcaaaacccaattcatcgatgccattgagatggaggatgaagac
ctcatcgcgcgcgaggacatggtcgtcacggtcagtcatgccggctatgtgaagcggacc
tctcttgacacctatcgggcccagcgccggggcggaaagggccggtccggcatggcgatg
aaggacgatgatttcatcagccaattatttgtcgggaatacgcacaccccgctgttgttt
ttcactgatcgggggatggcgtataagctgaaattgtggcgcctgcccgaggggggaccg
acctcccgcggcaaggcgttcatcaatctcttgcccctcgatcagggcgagcgggtgacc
aatatcctgccccttcccgacgacgaagcccaatgggcggatatggacattgtcttcgcc
acgcggagcggcaatgttcgtcgcaataagctctccgatttcaccaatgtgaataaggcc
ggcaagatcgccatgaagctcgatgaaggcgatgccttggtcggggtcgggatcgcgcgg
gaaagcgaagacattctgctgaccacgcgtaacgggatgaccattcgtttcccggtcgac
gcggtgcgggtcttcagtgggcgcacctcaacgggggtgcggggtatcaggttcaaaccc
aatgacgagttcggcgaggacggcgtcatgtccatggcgatcctgcggcatctcgacgtg
tcctccgaagaggccaaggcctatctcaaacatgccgccgccatgcggcgcgcggccgga
gagggagagaccgaaggctccgacgctgaggcggaggggtcggaggcagccctctccaca
gagcggttggccgcaatgcaagcggcggagcaattcattctcaccgcgacggagaacggc
tacggcaaacgcacctcctcctttgagtaccgcacctcagggcgcggcggtcaggggatc
gccgggatcgtcacctcggcgcgcaacggccgggtcgtggccagtttccctgtcgaggat
gccgacgaaatcatgctggtcaccgatggcggtcaattgatccgaacgggcgtggccgat
atccgtgtggcgggtcgcaatacccaaggggtcaagatcctcaccacgcgggagaccgaa
cgggtggtttccgtcgagcatgtacccgaagcgcaaaatgacgacgacctccccgacgat
gaaacggagatgtaa
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