Parvularcula bermudensis: PB2503_11114
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Entry
PB2503_11114 CDS
T01298
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pbr
Parvularcula bermudensis
Pathway
pbr03030
DNA replication
pbr03430
Mismatch repair
pbr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PB2503_11114
03430 Mismatch repair
PB2503_11114
03440 Homologous recombination
PB2503_11114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbr03032
]
PB2503_11114
03400 DNA repair and recombination proteins [BR:
pbr03400
]
PB2503_11114
Enzymes [BR:
pbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PB2503_11114
DNA replication proteins [BR:
pbr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PB2503_11114
DNA repair and recombination proteins [BR:
pbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PB2503_11114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
AAA_5
AAA_22
SIP
RraA-like
NPHP3_N
nSTAND3
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
ADM10270
UniProt:
E0TIF1
LinkDB
All DBs
Position
complement(2224371..2225366)
Genome browser
AA seq
331 aa
AA seq
DB search
MSASSALLVRPALIETVDTALGRGAMIGGWLLTGPPQIGKRLLADRLAAALLSGAKAIDA
ADPAIVGQIAEEAHPDYFLVTRRPDEKTGKLPRTILVNDIREMIARFYQTSVSGRRVVVI
DAADEMNASAANALLKSLEEPPQGATLLLLASAPGRLLPTIRSRCRRLDLGPSPLGEIAQ
WLETHHAIPADEARAAAALSDGRPGRALHWASGEGREVRGLADSLIAAAATGRDLTATAG
QFAARDAAEIRRDAELLVLDRLAGATRRLAVGERPDPPFDRLSDPQRALESYDRLVTLTS
QGEALNADRGQTALAMAMTLRDALRGGHVHR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgagttcagctcttttggtgcggccggcgctgatcgagacggtcgatacggcc
cttggccggggcgcgatgattgggggctggttgctgacggggccgccgcaaatcggcaaa
cgtctccttgccgatcggctcgccgccgcccttttgtccggcgcaaaggcgatcgacgcc
gccgatccggcgattgtcggtcagatcgccgaggaggcgcatcctgactacttcctcgtg
acccgacggccggacgaaaaaaccggcaaacttccccgcacgattctcgtcaatgacatc
cgggaaatgatcgcccggttttaccagacatcggtcagtggacgtcgcgtcgtggtcatc
gatgcggccgatgagatgaatgccagtgccgccaatgcgctgctcaaaagcctcgaagag
ccgccgcagggcgcgacgctgctgctcctggcgtcggcgccaggccggctcttgccgacg
atcaggtcacggtgccgccgtttggatctcggaccgagccccttaggcgagatcgcgcaa
tggctcgagacccatcacgccattcccgcggacgaggcgcgcgctgccgccgccctcagc
gatggccgccccggccgggcccttcattgggccagcggcgaggggcgcgaagtgagggga
cttgccgactcgctgatcgccgctgccgccacagggcgcgatctgacggcgacggcggga
cagttcgccgcacgggacgccgccgaaattcgccgagatgccgagttgcttgttcttgat
cgtcttgccggcgcgacgcggcgcttggccgtgggggagagacctgacccgcccttcgat
cggttgagcgatccgcaaagggcgctcgaaagctatgaccgtctcgtgaccctgacctcg
caaggggaagcgctcaatgcggatcgtgggcagaccgctttggcgatggccatgacgtta
agggatgcgctacgggggggccatgttcatcgatag
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