Parvularcula bermudensis: PB2503_11419
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Entry
PB2503_11419 CDS
T01298
Name
(GenBank) Putative TonB dependent Vitamin B12 outer membrane receptor
KO
K16092
vitamin B12 transporter
Organism
pbr
Parvularcula bermudensis
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbr02000
]
PB2503_11419
Transporters [BR:
pbr02000
]
Other transporters
Pores ion channels [TC:
1
]
PB2503_11419
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ADM10329
UniProt:
E0TCH3
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All DBs
Position
complement(2304345..2306189)
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AA seq
614 aa
AA seq
DB search
MGLSAWALSGALAVVGNQPQGDGRDQAEEDIIIVDGTRLPQSLAETGTAISVLDRTDLER
RQSPFLVEALAAQPGVTVNTNGAFGGTASVRLRGAASAQTLLVIDGLPVNDTAAPAGGYD
FSRLGTAGIKTVEVLKGPQSVLWGADAIGGVVLVNTVTPRREGISGTVGAELGSFATRSG
MVDLELGGSSGGLALIGNALTTDGISKADEAAGNEESDGFHRAQWLIKGDVDLGAHATLT
GSFFGSEARTDLDRFDASAVGSVADGDDYDEAAEQGGQVRLNLGGDGHLFAHEFTLGTWR
LSRDSFSGGQLSFSTEGERQLYRYLGKGKLGQRNRIALGVEQEKTSVETEDATTDSLFLL
HEFRASDRLTLTIGGRIDDDSRFGSETTTRIAAAYDVTDALTLRGNWGEGIKAPSVFQTT
YVCTFCGLTEPNDELRAERAEGTELGFDWDPAYFPATLSMTVFQQSFDDLIDFTFTDGYV
NIDHVETVGGEAAVRLVPLPWLTVDGAYTFLDTEDEAGDLLIRLPRHSGDLALIGEGTGR
LSGALFVRYNGEEQTVSGEDLPAWTRVDVTATYALTDDLVFYSRIENLFDEEYQQVLGYG
TPGRSGFIGVKVEY
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgggattgagcgcgtgggcgttgagcggggccttggccgtggttgggaatcaaccgcag
ggggatggccgcgaccaggccgaagaagacatcattatcgttgacggaacgcggctgccg
caatctctggccgagaccgggaccgcgatatccgtccttgatcggaccgatcttgaaagg
cggcaatcgccttttctggtcgaggccctggcggcccagccgggggtcaccgtgaacaca
aacggcgcctttggcggcacagccagcgttcgcctacgcggggccgcttcggcccagaca
ttgttggtgatcgacggtcttcctgtgaacgatacggcagcgcccgccggggggtatgat
ttcagccgcttgggcacggcggggatcaagacggtcgaagtgctcaaagggccgcaatcg
gtcctttggggggccgatgcgattggcggtgttgttttggtcaacacggtcacgcctcgg
cgtgaggggatctcgggcacggtcggggcggaacttggctcttttgccacccgctccggc
atggtcgatcttgagctcggcggctcatcgggcggccttgccctcatcggcaatgcgctg
acgacagacggcatttccaaggccgatgaagccgcgggaaatgaggaatcggacggattc
catcgcgcccaatggctgatcaagggcgatgtggatctcggtgcccatgccactctaacg
ggtagctttttcggcagcgaggcgagaaccgatctcgaccgtttcgacgccagcgcggtg
ggaagcgtcgccgacggcgacgactatgatgaagccgcggagcaggggggacaggtgcgt
ctcaatctcggcggggacggccacctcttcgcccacgaattcaccctcggcacttggcgc
ctttcgagggatagcttttcaggcgggcaactcagtttctctacggagggagagcgacag
ctctatcgttacctgggaaaggggaagctggggcagcgcaatcgtatcgccctaggcgtt
gagcaggagaaaacgtcagtcgagaccgaggacgccaccaccgacagtctttttctgctg
cacgaatttcgcgcaagcgatcgcctcaccctcaccatcgggggacggattgatgatgat
tcccgatttggatcggaaacaaccacgcggatcgcggcagcctatgatgtgacggacgcc
ctgaccttaaggggaaattggggggaggggatcaaagcgccctctgtgttccaaaccacc
tatgtttgtactttttgcggcctgacagagccgaatgacgagctgcgggctgagcgggcc
gagggcactgaactcggctttgattgggatccggcatattttcctgccaccctttcgatg
accgtatttcagcagtcctttgacgatctgatcgatttcaccttcaccgatggctatgtg
aatattgatcacgtcgagacagtggggggggaggcagcggtccgtctcgttccgctcccc
tggcttaccgtcgacggggcctatacctttttggacacggaggatgaggcaggcgatctt
cttattcgcctcccccgccatagcggcgatttggccttgataggggaggggacaggccgc
ctctccggcgcgctgttcgtccgctataatggcgaggagcagaccgtaagcggtgaggac
ctgcccgcatggacccgggtcgatgtcaccgcaacctatgcgctcacggacgatctggtc
ttctatagccggattgagaacctgttcgatgaggaatatcagcaggtcctcggctacgga
acaccgggccgctcaggcttcatcggggtgaaggttgagtattga
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