Parvularcula bermudensis: PB2503_12049
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Entry
PB2503_12049 CDS
T01298
Name
(GenBank) Bacterial nucleoid DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
pbr
Parvularcula bermudensis
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbr03032
]
PB2503_12049
03036 Chromosome and associated proteins [BR:
pbr03036
]
PB2503_12049
03400 DNA repair and recombination proteins [BR:
pbr03400
]
PB2503_12049
DNA replication proteins [BR:
pbr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PB2503_12049
Chromosome and associated proteins [BR:
pbr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PB2503_12049
DNA repair and recombination proteins [BR:
pbr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PB2503_12049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ADM10452
UniProt:
E0TEI0
LinkDB
All DBs
Position
complement(2450307..2450579)
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AA seq
90 aa
AA seq
DB search
MNKNEFVDRVAAIADITKADAGRTVDAVFDAITEALKNGDDVRIVGFGTFSSSRRPAREG
RNPRTGETIQIKASNQPKFSAGKGLKDALN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaatgaattcgtcgaccgcgttgctgctattgccgatatcaccaaggccgat
gcgggacgcactgtcgatgccgttttcgacgcgatcaccgaagcgctgaaaaacggcgac
gatgtccgcatcgtgggcttcgggacgttttcttcctcacggcgccccgcgcgcgaaggg
cggaacccgcgcaccggcgaaaccatccagatcaaagcgtcgaaccagccgaaattttcc
gctggtaagggactgaaagacgccctcaactaa
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