Parvularcula bermudensis: PB2503_13004
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Entry
PB2503_13004 CDS
T01298
Name
(GenBank) possible poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pbr
Parvularcula bermudensis
Pathway
pbr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PB2503_13004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbr03019
]
PB2503_13004
Enzymes [BR:
pbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PB2503_13004
Messenger RNA biogenesis [BR:
pbr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PB2503_13004
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ADM10638
UniProt:
E0TG67
LinkDB
All DBs
Position
complement(2659125..2660321)
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AA seq
398 aa
AA seq
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MTADPFAWARSGDAAKLLAILNEEGEARFVGGCIRDSLLGQPPGAAGHTDIDIATTLLPE
ETLKLLGRHGIRVIPTGLEHGTVTAVLSAVPFEITTLRCDVATDGRHATVSFTEDWEKDA
ARRDFTINALSLDKEGRLYDYHDGRADLMARRVRFIGRPAQRIKEDYLRILRFMRFSARF
GGTLDVAGWQASEALAGGLLHLSKERIWSEVSRLFCAAGAPTVLSEAAKGPILDAIIQVA
PDPVSFARIHAAREGAPSAGLCLAALWPTATRSMLQSAFKPPTSVLAHALTLPEIAKVWE
AGATPREVLFSYGRPAAEEGLALCRLSAAAKAEIVRALTTAPVPVLPVRGADFIAAGLTA
GPMVGNALKDFTERWAQANFPEDPAIVRSLFDEVMAAI
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggaccccttcgcttgggcccgctcgggggacgcagcaaagctcctcgccatc
ctcaacgaggaaggggaggcccgtttcgtcggcgggtgtatccgggacagcctgctgggt
cagccgccgggcgctgcggggcataccgatatcgatatcgccacgaccctgctgcccgaa
gagacgctaaagctgttgggccgccacgggataagggtcatcccgacaggtcttgaacat
ggtacggtcactgccgttctgtctgccgttccttttgaaataacgaccctgcgatgcgac
gtggccaccgatggccggcatgcgaccgtctcctttacggaggattgggaaaaagacgcc
gcgcggcgagatttcacaatcaacgccttgtccctcgataaggaggggcgcctttacgac
tatcatgatggtcgggcggatctgatggcgcggcgggtacggttcatcggtcgaccggca
caacggatcaaggaagattatctccgcatactccgttttatgcgattttcggctcgtttc
ggcggcactctcgacgtcgccggatggcaggcgtccgaggcgttggccggtggcctgctt
catctctctaaagaacggatctggagcgaggtgtcgcgactcttttgcgcggcgggggcc
ccgacagttttgagcgaggcggcgaaggggccgatactcgacgcgatcatccaggttgcc
cccgaccccgtgagcttcgcgcggatccacgccgcgcgggagggggcgccgtcagcgggg
ctgtgcctggccgcgctgtggccgacggcgacgcgatccatgctgcaatcggctttcaaa
ccgcccactagcgtgctcgcgcacgccctgaccctgccggagattgccaaggtctgggaa
gccggcgccaccccaagggaggtgctcttcagttatggccgccctgccgccgaggagggg
ctcgccctttgtcgtctgtccgcggcggcgaaggcggaaatcgtccgtgctctgacgacg
gcgccggttccggtattgcccgttcgcggggcggatttcatcgcggcgggtttgaccgcc
ggtccgatggtggggaacgcgcttaaggacttcaccgagcggtgggcccaggccaatttt
cccgaagaccccgccattgtgcggtcgctcttcgatgaagtgatggcggcgatctaa
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