Parvularcula bermudensis: PB2503_13289
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Entry
PB2503_13289 CDS
T01298
Name
(GenBank) hypothetical protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pbr
Parvularcula bermudensis
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbr03400
]
PB2503_13289
Enzymes [BR:
pbr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
PB2503_13289
DNA repair and recombination proteins [BR:
pbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
PB2503_13289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
ADM10695
UniProt:
E0TGT6
LinkDB
All DBs
Position
complement(2722111..2723640)
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AA seq
509 aa
AA seq
DB search
MAVLRLILGDQLSRSLSCLRDADKEKDVILLAEVREEATYVRHHKQKIVFLFSAMRHFAD
DLSKDGYEVRYIRYDDDGNTHSLGGEVKRALDEREDLEGLIVTECGEYRLAEEMASWSRR
FGRSVEIREDDRFFCSLKEFDEWAGDGKTLRMEYFYRDMRRRTGLLMEGDAPAGGEWNYD
QENRKRLPKEYKAPERKTIRHDETTKDVIDLVDAAFADHFGSLEDFRYGVTRNQARRQLD
DFIETSLPNFGDYQDAMGTGEDFLNHSLLSAYINAGLLLPREVCEAAEEAYRDGQAPLNA
VEGFIRQILGWREFIRGVYWREMPGYKDDNALDAKRSLPAFYWTGETDMHCLAEAIRNTR
DHAYAHHIQRLMVTGNFALLAGVVPAEIEEWYLIVYADAYEWVELPNVRGMAIFADGGVF
ASKPYAASGSYINRMSDYCKSCTYSVSKKIGEGACPFNYLYWDFLIRHEDRLRSNQRMSL
VYGNLDKKSADDRQAITEQATEFLDSLET
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggctgttctgcgattgatcctgggggaccaactctcccgctccttatcctgcttgcgc
gatgccgataaggagaaagacgtgatcctgctggccgaggtccgggaggaagcgacctat
gtgcggcatcacaagcagaaaatcgtgtttttgttctcggcgatgcggcatttcgccgac
gatctgtccaaggatggatatgaggttcgatatatccggtatgatgacgacgggaacacc
cacagtctcgggggagaggtcaaacgcgcccttgacgaacgagaggatctcgagggcctc
atcgtcacggaatgcggcgaatatcgattggccgaagaaatggcgtcctggtcgcgccgc
tttggtcggtcggtggagatccgcgaggacgaccgcttcttctgttcccttaaagagttc
gatgaatgggcgggggacggcaaaaccctccgtatggaatatttctatcgtgatatgcgg
cgtcgcaccggcctcttgatggagggcgatgcgccggcgggaggggaatggaattacgat
caggagaaccgcaaacgcttgccgaaagaatataaggcaccggagcgcaaaacgatccgc
catgacgagaccacgaaagacgtgatcgacttggtcgacgcggcattcgccgatcatttc
ggtagcctcgaagatttccggtatggagtgacccgaaatcaggcgcgccggcaattagat
gacttcattgagacatcgctgccgaactttggcgattaccaggatgcgatgggaacggga
gaagatttcctcaaccattcattgctttccgcctatatcaatgccggtctcctcttgccg
cgggaagtctgcgaggccgctgaagaggcgtatagggacggtcaagcgccgctaaacgca
gtagagggcttcatcaggcagatccttgggtggcgggagttcattcgcggcgtctattgg
cgtgaaatgcccggttataaggacgataacgcgctggacgcgaaacggtcccttcccgcc
ttttactggaccggcgaaaccgacatgcactgtctggctgaggccatccgaaatacccgc
gatcatgcctatgcgcaccatattcagcggttgatggtcaccggtaattttgccctcttg
gccggggtcgtgccggccgagatcgaggaatggtatctgatcgtttatgccgacgcctat
gaatgggtggagctgccgaatgttcgtggcatggcgatcttcgcagatggaggggtcttt
gcctcaaagccctatgccgcgtcaggaagctatatcaatcggatgtcggattattgtaag
tcctgtacctatagcgtctccaagaaaataggggagggcgcctgtccgttcaattatctc
tactgggattttttgatccgccatgaagaccggctgaggtccaatcagcgcatgtcgttg
gtgtacggcaatctcgataaaaaatccgccgatgatcggcaggcgatcaccgagcaagcg
accgaatttctcgatagtttggagacctga
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