Pectobacterium brasiliense: B5S52_00420
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Entry
B5S52_00420 CDS
T06364
Name
(GenBank) hypothetical protein
KO
K15125
filamentous hemagglutinin
Organism
pbra
Pectobacterium brasiliense
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pbra00536
]
B5S52_00420
Glycosaminoglycan binding proteins [BR:
pbra00536
]
Heparan sulfate / Heparin
Microbial pathogens
B5S52_00420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF637
Toxin-deaminase
Fil_haemagg_2
Motif
Other DBs
NCBI-ProteinID:
ARA74435
LinkDB
All DBs
Position
complement(86887..91524)
Genome browser
AA seq
1545 aa
AA seq
DB search
MAVDTKALGGMYAERIRLVATEDGVGANVANLTSSQQGITLDSKGKIQLGNVHAKTDLNL
TAQQVDIAAGNTVKSDRDITLASTTLNNQGNIVAGEDMRLFNDNLTNTQAIIEANNNLWI
QKDATGNKGVKVENRSGTIKTNTGDLVIRTEQLDNLRHQFTIEDNDIVPTSTSIKPSEEG
AEITHQPHFKDNKNKKWFGDAIDNGVALTINEAKTQYLLSQETPEATILSGKNIYINATQ
LNNNASLISASNNIMLTGKNFTSLSHRLGTMDIQSDYIYDIEENLRTPPPAPNFFDPNRK
DSSWVKILDSFYNWRESLPLSSRITAGSDLVVDFIDTLSFDKKAPYDIKTPDTVFTITSQ
PAITAKNIVLNGKNIFINDTLQATGNITAIAEENISISDAKLQAEKNLSAIAGNNISAFQ
GNFISQNAMLTSRTGDITIHSQPKDENYLTGLYYTPEKRQKFSTLSASDNLDINSGGNIH
LSDIEISQSKNIALTANKDILFIHSDNFLQQSPDLSPSSEQRQPLYNDALLRTSEVNATN
DILMNAGGSLLLQGKRLNAGKDINLSGALDVIINPKSKTKGYSLDFLPSRAPESVSQLYS
GNNLQISAGRDIEAQGMKVKSKGRATLVAGRDFTLPALAYSFIDDLNDNNKDDRQSVASL
HTDKELTLSANGSLIATGTDFSSGGDMALSSGGKMEFNAVANHIYREGGNEYSESVTQKN
AVLNSGGILTLLSNGSILFQATQLIAKGALDAAAKGGFLYAQAAEESSHYEKTTTTRKWY
GKKTTIRQTSHNVTNKVTEFTAGGDINLLSRDDSTYEASKINAGKNAKLTSTQGSINFKA
VKDTAFEQTITTSKGFFIKSNDKGYTKDTWLLPSIHSGGQLTLDAATGITADAKTQNAQS
LQNALLVLSNNPGTAWLKDLNSRTDVQWNTVQDAYSTWNHTTQSLNPVVGAVIAIAVAAV
TAGAGLAAAAGNMAVGAVGTGASATTIAVVNGAAYSGMTALTSQAAVALVDNKGNLSKTF
QAMSSSDSVKSLVTSMVIGGALAGFDEVMQFSKAANGTTVIDPAKAKLPMLSNGDWSKVA
QRVAGQSVISSSIGTAINGGSFKDNFTTALLSNIGSQINAEGAKFIGDNGTVLDVPGKAL
SHAVVAGIAAEISGGNVKGAAAGALAAELAGIIINDNLVKSEGWQEKQAQISRFAGAVMG
AVATGKASGVNSGANAAEIVERFNRQLHLDEIQAIKEIAKGDKEKEMRLLAASCRKVNCV
AQESLNSEERQQYETLMALYPATREEDGILANYWVQKDRQRTSNYPLYVGYDMEQLFTYT
TGDSISDGQMFARNQWIENFSQMTGWSKDTVEALGFGISIASTFAGIGKAGVGNQYLSKS
LVTPTAGWKSYLVNEKTIQQAAGFRQQVLDARAPFSRDIRASGNVAVAQIDIPDMPKSMA
AHSRIDIGEKSFVGRGSENFKYEVIKNNEGKPISRNTDSEYKILDNLADKLGGNVKAQGK
VTIFTERAACESCLGVVDQFQKKYPGITVEVIDNNDVMLVPRRLK
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
ttggcggttgataccaaagcgctcggcggtatgtatgcagaacgcatccggctcgtggca
accgaggacggagtcggcgctaacgtcgccaacctgaccagctctcagcaaggcattacg
ctggacagcaaaggcaaaatccagctcggtaatgtacacgcgaaaaccgaccttaatctg
actgcacagcaggtcgatattgctgctggcaatacggtgaaaagcgaccgcgatatcacg
cttgccagtaccacattgaataaccaagggaatatcgtcgcgggtgaagatatgcgcctg
ttcaacgataacctgaccaacacacaggctattattgaagccaacaacaacctgtggatt
caaaaagacgcgacgggaaacaaaggcgttaaagtcgaaaaccgctcggggacgattaaa
accaatacgggggatttggtgattcggacggagcagttggataacttacgtcaccagttc
acaatagaagataatgacatcgttccaacctcaacatccatcaaaccttcagaagaaggt
gcagagataacacatcaacctcattttaaagataataaaaataagaaatggtttggggat
gctattgataatggtgtcgcactgacaattaatgaggcgaagacgcagtatctcctgtct
caggaaacgcctgaagctacaattctttctggtaaaaatatttatattaatgcaactcaa
ttgaataacaatgccagtttaatctcagcatcaaacaacatcatgcttaccgggaaaaac
ttcacctcgttaagccatcgactggggacaatggatatacagtctgattatatttatgat
attgaggagaatttacggaccccaccaccagcccccaatttttttgacccaaatagaaaa
gattcctcatgggttaaaatattagactctttttacaactggcgtgagagcctaccatta
tcttctcgcattacggctggaagtgatctggttgttgatttcatagacacattaagcttt
gataaaaaagcaccttacgatatcaaaaccccagatacagttttcactattacatctcag
ccagctattaccgcaaaaaacatcgtactaaatggaaagaacattttcatcaacgatacg
ttacaagcaacaggaaacataacggcgatagcagaagaaaatatttctatctccgatgca
aaacttcaggctgagaaaaatttatcagccatagcgggtaataatatttctgcttttcag
ggaaatttcatcagtcaaaacgctatgctcacaagccgtacgggtgacattacgatacac
agtcagcccaaagatgaaaattatttaacagggctttattatacaccagaaaaacgtcaa
aaattctccacactctctgcttctgataatctagacattaactcgggtggtaatatacat
ctatctgatatagagatatcacaaagcaaaaacatagcccttacagcgaataaagatata
ttatttatccattctgacaatttcttacaacaatcgccagatctttctccatcttcggag
caacgtcagcctctttacaacgatgccttactaagaaccagcgaagttaacgccacgaac
gatattttaatgaatgctggtggcagtcttctgttgcaaggaaaacgccttaatgcagga
aaagatatcaacctcagcggtgcattggatgtaataatcaatccgaagagtaaaacaaaa
ggatattctctcgattttctaccaagtcgtgccccagagagcgtcagtcaactatatagc
ggcaataacctacaaattagcgcaggacgggatattgaagctcaaggaatgaaagtaaaa
agtaaaggaagagctacactagtcgctgggcgcgatttcactcttcccgcattagcatac
tcattcattgatgatttaaatgataacaataaagatgatcgccaatctgtagcctcactt
cataccgataaagaattaacgctctcggcgaatggctctcttattgccaccggaaccgat
ttctcttccggtggtgatatggcattaagttccggcggaaaaatggaatttaacgcagtg
gctaatcatatctatcgggaaggaggcaacgaatatagcgagtccgtgactcagaaaaat
gccgttttgaacagcggcggaatactcacgctgttatctaacggcagcattctcttccag
gcgacccagcttattgctaaaggtgcattagatgcggcagccaaaggcggtttcctctac
gcacaagcggcggaagaaagtagccattacgaaaaaaccaccaccacacgcaaatggtac
ggcaagaaaaccaccattcggcaaaccagccacaatgtcacaaacaaagtgacagaattc
accgcaggcggtgatatcaatctgctcagccgtgatgacagcacctatgaagccagcaaa
atcaacgcgggcaagaatgccaagctgaccagcacacaaggaagcattaacttcaaggcg
gtcaaagacactgcattcgagcagacgatcaccacctcaaaagggttcttcatcaagagc
aatgacaaaggctataccaaagacacttggttacttccaagcattcactctggcggacaa
ctcactcttgatgccgctaccggcattaccgctgatgcaaaaacccagaatgcgcagtcc
ctgcaaaatgctcttttggtgctgagcaacaaccccggcactgcctggcttaaggattta
aacagccgcacagatgtgcaatggaacacggtacaggatgcctatagcacctggaaccac
acaacacaaagcctgaaccctgttgttggagccgtgattgcgattgccgttgcggcggta
accgcaggagcaggcctggctgctgctgcaggtaacatggcagttggtgctgtgggaacg
ggagccagcgcgacaacaattgctgtcgtaaacggtgcagcttattcaggaatgacggca
ctgacctcgcaggcagcagtcgcgctggtggataacaaaggcaacctgtccaaaacgttc
caggccatgagcagcagtgactcggtcaaatcactggttacctcaatggtgatcggcggt
gcattagcaggcttcgatgaagttatgcaatttagcaaggctgctaacggcacaaccgtc
atcgatcctgccaaggccaaactgcccatgctcagcaacggtgactggagcaaggtcgcg
cagcgtgtcgctggacagtcagtgatcagttccagcatcggtactgcgattaacggcggt
agcttcaaagataatttcaccacagcactcctgagtaatatcggcagtcagatcaatgcg
gaaggggctaagtttattggggataacggtacagtccttgacgtaccgggcaaagccctc
agccatgctgttgtcgcaggtatcgctgctgaaatcagtggtggtaacgtcaaaggcgct
gcggctggtgcattagcggcagagctggctggcataattattaacgataaccttgtaaaa
tcagaagggtggcaagaaaagcaggcacaaatcagccgtttcgcgggtgcagttatggga
gcagtagccacaggtaaagccagtggcgtcaatagcggtgccaacgccgctgaaattgtt
gaacgctttaatcgacaattacaccttgatgaaattcaggccatcaaagagattgccaaa
ggtgacaaagagaaagaaatgcgcctgttggcagcatcctgccgcaaagttaactgtgtg
gcacaggaatcattaaattcagaagaacgccagcaatatgaaacgttgatggcactgtac
ccagcaacacgcgaagaagatggaatactcgccaattattgggtacagaaagatcggcaa
cgtactagcaattacccgctttatgtgggctatgacatggaacagctgtttacctatact
acaggcgacagcatttctgatggtcagatgtttgccagaaaccaatggattgaaaatttt
agccagatgacgggctggtctaaggacacagtcgaagctttaggttttggtatttcgata
gcaagtacattcgcgggcatcgggaaggcaggcgtcggtaatcagtacctgtcaaaaagc
ctcgtgacgccaaccgcaggctggaaaagttatctggttaatgagaagaccatacagcaa
gcggctggttttaggcagcaagtgctggacgcaagagcaccattttcacgtgacataaga
gcctcaggtaatgtggccgtggcacaaattgatatacccgatatgccaaaatccatggct
gcacatagtaggattgacatcggggaaaaaagttttgtaggaagaggcagtgaaaatttt
aaatatgaagttattaaaaacaatgaaggaaagccaatatctagaaatactgactctgaa
tataagatactggataatctggctgacaagttggggggtaacgtcaaagcacaaggtaaa
gttaccatctttacggaacgggcagcatgtgagagctgccttggtgttgttgaccagttt
cagaaaaaatatccgggaatcacagtggaagttattgacaataatgacgtaatgttagtc
ccgaggagattaaaatga
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integrated database retrieval system
