Pectobacterium brasiliense: B5S52_03325
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Entry
B5S52_03325 CDS
T06364
Name
(GenBank) RNA polymerase-binding ATPase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pbra
Pectobacterium brasiliense
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbra03021
]
B5S52_03325
Transcription machinery [BR:
pbra03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
B5S52_03325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
Motif
Other DBs
NCBI-ProteinID:
ARA74968
LinkDB
All DBs
Position
complement(725723..728626)
Genome browser
AA seq
967 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAVDTRMITLLFPASGENRLYSRSDAPITRVMFNPGDT
VTSHEGWQLKVDDVREEKGLLVYCGQRLDDETSAELREVFLDSKLTFNKPQDRLFAGQID
RMDRFALRYRARKHQNEQALQQQVGLRGMRASLIPHQLHIAHEVGQRHAPRVLLADEVGL
GKTIEAGMIIHQQLLAGRASRVLIVVPETLQHQWLVEMLRRFNLLFSLFDDERYAEAKLD
SSNPFETEQLVICSLGFVQRSAQRFAQLVNADWDLLVVDEAHHLVWSEESPSPEYQAIET
LARATPAVLLLTATPEQLGQQSHFARLRLLDPNRFHDYQEFVAEQQQYRPVADAVTLLLA
GEKAQTAELNALSDLLGEQDIEPLLKAINSDSDDNQKARQELITMLMDRHGTSRVLFRNT
RQGVKGFPQRILHQIRLPLPAQYQTAIKVSGIMNANKALEVRARDMLYPEQIYQQLEGDD
ATWWNFDPRVEWLLNYLTAHRDEKVLVICAQAATALQLEQVLRTREAIRAAVFHEGLSIL
ERDRAAAYFASEEEGAQVLICSEIGSEGRNFQFASHLVMFDLPFNPDLLEQRIGRLDRIG
QAKEIQIMVPYLESTAQALLVRWYHEGLDAFEHTCPTGRTIYDAHHTQLIERLTTVGEQQ
GLDEFIHVCRQQHDSLKQQLEQGRDRLLEMHSNGGEQAQLLAQAIAEQDNDVNLVTFALN
LFDIVGINQEDRSDNLIILTPSDHMLVPDFPGLPQDGCTITFDRDQALSREDAQFISWEH
PLIRNGLDLVLSGDTGSCAVSLLKNKALPVGTLLAELVYVVEAQAPKHLQLTRFLPPTPV
RLLMDRKGTNLAAQVEFESFNRQLNAVNRHTSSKLVNAVQPDVHAMLQQAEALMETQARQ
LIAEAQEQADLQLRRELERLEALKAVNPNIREDELTALENQREQVLSNLHEANWRLDAIR
LVVVTHQ
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcagcgctggatcagcgatacggaaagcgaacttggactggga
acggttgttgccgtcgatacgcgtatgattacgctgcttttccctgccagcggtgaaaac
cgactttattcccgcagcgacgcccccatcacccgcgtgatgttcaatcccggcgacacc
gtcaccagtcatgaaggctggcagctcaaagttgatgacgtgcgagaagaaaaagggttg
ctagtgtattgcggccaacgcctggacgatgaaacgtcggcggaactgcgtgaagtcttc
ctcgacagcaaactgacgttcaacaaaccgcaagatcgcctgtttgccgggcagattgat
cgtatggatcgctttgcgctgcgctaccgcgcccgcaagcatcagaacgaacaagcgcta
cagcagcaggtcggattgcgcggcatgcgtgccagccttatcccccatcagttgcatatc
gctcatgaagtcggccaacgccacgcaccgcgcgttttgctggcggacgaagtcggtctg
gggaaaaccattgaagcggggatgatcatccaccagcagttgctggcaggtcgtgccagt
cgcgtgctgattgtcgtgccggaaactctgcaacatcagtggctggtcgaaatgctgcgc
cgctttaacctgctgttctcactgtttgacgacgaacgctatgccgaagccaagctggac
agcagcaatccgtttgaaaccgaacaactggtcatctgctcactgggatttgtgcaacgc
agcgcccagcgctttgcgcagctcgtcaacgccgactgggatctgctggtggtggatgaa
gcccaccatctggtctggagcgaagaaagccctagcccggaatatcaggccattgaaacg
ctggcacgcgccacgccggccgttctgctcttaaccgcgacgccggaacagctcggccaa
cagagccactttgcgcgcttacgcctgctcgatcccaaccgtttccacgactatcaggaa
ttcgttgccgaacagcagcagtaccgcccggttgccgatgccgtcacgctgctgttagcg
ggcgaaaaagcccaaacggctgaactgaatgcgctgagcgatctgctgggcgaacaggat
atcgagccgctgctgaaagccatcaacagcgacagcgatgacaatcagaaagcgcgtcag
gaactgatcaccatgctgatggatcgccacggtaccagccgtgtgctgttccgtaacacg
cgtcagggggttaaaggcttcccgcagcgtatcctgcatcaaatccgcctgccgctgccg
gcgcagtaccaaacggcgattaaagtgtccggcattatgaacgcgaataaagcgctggaa
gtccgcgcccgcgacatgctgtacccggaacaaatttatcagcagctcgaaggggacgat
gccacgtggtggaacttcgatccgcgcgtggaatggttactgaactacctgactgcacac
cgtgatgaaaaagtgctggtgatctgtgcacaggcagctactgcgctacagctggagcaa
gtgctgcgcacgcgtgaagcgatccgcgccgccgtcttccatgaagggctatcgattctg
gagcgtgaccgcgctgccgcctattttgcttctgaagaagaaggcgcacaggtgctgatc
tgttcagagatcggttccgaaggccgtaacttccagttcgccagccatttagtgatgttc
gatctgccgttcaaccccgacctgctggagcagcgtattggtcgtctggaccgtatcgga
caggccaaagagattcagattatggtgccgtatctggaaagcaccgcacaggcgttgctg
gtgcgctggtatcacgaagggttggatgcgtttgagcacacctgcccgacaggccgaacc
atctatgatgcgcaccacacgcaactgatcgagcgactgacgaccgttggtgaacagcag
ggactggatgagtttatccatgtttgccgtcaacagcacgacagcctgaaacaacagctt
gaacaaggccgcgatcgcctgttggaaatgcattctaacggtggcgaacaggctcagctg
ctagcgcaggccattgccgagcaggataatgacgtcaatctggtgacattcgccctgaac
ctgttcgatattgttggcatcaatcaggaagatcgcagcgataacctgatcatcctgacg
ccatccgatcatatgctggtgccagacttcccgggcctgccgcaggacggctgtacgatc
accttcgatcgcgatcaggcgctctctcgcgaggacgcacagtttatcagttgggaacac
ccgctgatccgtaacgggctcgatctggtgctgtccggcgataccggaagctgcgcagtg
tcgctgctgaaaaataaagcgctgccggtcggcacgctgctggcagaattggtttacgtg
gtggaagcgcaggcaccgaaacacctgcaactgacccgcttcctaccgcctacgccggtt
cgcctgctgatggaccgtaaaggcaccaatctggcggcacaggttgagtttgaaagcttc
aaccgccagctcaatgcggtaaaccgccatacgtccagcaagctggtgaatgccgtacag
cctgatgttcacgccatgctgcaacaggcagaagcgctgatggaaacgcaggcgcgccag
ctcatcgccgaagctcaggagcaggctgacctgcaattgcgccgcgagctggaacgtctg
gaagcgctgaaagccgtcaaccccaacattcgtgaagatgagctgactgcactggaaaac
cagcgcgagcaggtgctgagcaacctgcatgaagccaactggcgtctggatgcaatccgt
ctggttgtggtaacgcatcagtaa
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