Pectobacterium brasiliense: B5S52_03785
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Entry
B5S52_03785 CDS
T06364
Name
(GenBank) glycyl radical enzyme
KO
K20038
choline trimethylamine-lyase [EC:
4.3.99.4
]
Organism
pbra
Pectobacterium brasiliense
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
B5S52_03785
Enzymes [BR:
pbra01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.4 choline trimethylamine-lyase
B5S52_03785
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PFL-like
Gly_radical
Motif
Other DBs
NCBI-ProteinID:
ARA75053
LinkDB
All DBs
Position
complement(834908..837403)
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AA seq
831 aa
AA seq
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MDNDALAPERNHFPFNNSLLNNEKMTMLGGIKKSSSLAEQEILTPRMQRLRARYLEARPS
ISIYRALAFTEVAKHNPGLPPILLRAKSFRKACETAPILIQDEELIVGHPCGKPRAGAFS
PDIAWRWVRDELDTMSTRPQDPFQISEEDKKTIRDEIVPFWQGRSLDEICETQYREAGVW
AFSGETFVSDLSYHQINGGGDTCPGYDVLLFTKGMEGIKADAQANLAQLDMEEPDNIDRI
YFYKAAIETCDGVMTYARRMAAHARELAAQETDASRRAELLTIAEINENVPAHPPKTLQE
ALQSIWTLESLFEVEENQTGISLGRVDQYCYPMYEADIQSGRLTREQALEMMQMFILKCA
ELMWMSSESGAKYFAGYQPFINLTVGGQKRSGGDACNDLTYLIMDAVRFVKVYQPSLACR
IHNQSPQAYLEKIVDVVKSGMGFPACHFDDSHIKMMLRKGFDFEDARDYCLMGCVEPQKS
GRIYQWTSTGYTQWPIAIEFVLNRGRMILFDRVQGLDTGELSTLDTFEAFDRAVKTQIAH
IIRLSAIGTVISQRVHRDVAPKPLMSLLVEGCMEKGQDVAAGGAVVNHGPGLIFSGLATY
VDSMASIRKLVYEDRQYTLEQLRDGLLANFSGYDELRRDCLNAPKYGNDDNAVDQLARDI
TEWTEKECRQYKMLYSTFSHGTLSISNNTPIGELTAASANGRLAWAPLSDGISPTQGADK
KGPTASIKSVSKMNVESMNIGMVHNFKFLKGMLDTPEGRNGLISLLRTSSILGNGQMQFS
YVDDEVLRKAQQTPEQYRDLIVRVAGYSAYFVELCKEVQDEIISRTMIDKF
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggataatgacgcattagcaccagaaagaaatcatttcccgtttaataacagtctattg
aacaatgaaaaaatgactatgctgggtggaataaaaaaatcatccagcctagcggagcaa
gaaatccttaccccacgcatgcaacgtcttcgcgcccgctatttagaggcccgccccagt
atttctatttatcgcgcactggccttcaccgaggtggcaaagcacaatcctggcctgccg
cctattctgttacgggcaaaatcctttcgtaaagcctgcgaaacggcaccgatactgatt
caggatgaggaactcatcgtaggccatccctgcggtaaaccgcgtgcaggggcgttctct
cccgatattgcctggcgctgggtgcgtgacgagctggacaccatgagcacccgtcctcag
gatccttttcaaatttcagaagaagataaaaaaaccattcgtgacgagatagtccccttt
tggcaaggccgctcgctggatgaaatttgcgagacgcaataccgtgaagcgggcgtctgg
gcattcagcggagaaaccttcgtcagcgatctttcttaccatcagattaacggcggcggc
gacacttgccccggctacgatgtgctgttgtttaccaaaggcatggaaggcatcaaagct
gatgcgcaggcgaatctggctcagcttgatatggaggaaccggataatatcgatcgtatc
tatttttataaggccgcaattgaaacctgcgacggcgtcatgacctatgcccgccgcatg
gcggcacacgcacgtgaactcgcggcacaggagaccgatgcttcacggcgcgctgaactg
ctgaccattgcagaaatcaacgagaacgtgccagcccatcctcccaaaacattgcaggaa
gcgctgcaaagcatctggacgctggagtcactgtttgaagtggaagagaaccagacgggg
atttcactggggcgtgtcgatcaatactgctacccgatgtatgaagctgatattcaatcc
ggtcgcctgacgcgcgaacaggcactggaaatgatgcagatgttcattctgaaatgtgcg
gaactgatgtggatgtccagcgaaagcggtgcgaaatatttcgcgggctatcagccgttt
atcaacctgacggtcggcgggcagaagcgtagcggaggcgatgcctgtaacgacttgact
tacctgatcatggatgcggtgcgcttcgtgaaggtgtaccagccgtcactggcctgccgt
attcacaaccaatcccctcaggcgtatctggagaaaattgtcgacgtcgttaaatcaggg
atgggctttccggcatgtcacttcgatgattcccatatcaagatgatgctgcgcaaaggc
ttcgattttgaagatgcgcgcgactactgcctgatggggtgcgttgaaccgcaaaaatca
ggccgcatttatcagtggacctccacgggctacacccagtggcccatcgctattgagttt
gtcttaaaccgcggccgtatgatcctgttcgatcgcgttcagggactggacactggtgaa
ttgagtacgctggataccttcgaggcgtttgatcgcgcagtgaaaacgcagattgcgcac
attatccgcttgtccgcgattggcacggtgatcagtcagcgcgtacatcgtgatgtcgcg
cccaagccgctgatgtccctgctggtcgaaggctgtatggaaaaaggacaggatgtcgct
gccggtggcgccgtcgtcaatcacggaccggggctcattttctcggggctggcgacttac
gttgattccatggcgtctatccgcaagctcgtttatgaagaccgccaatacacgctggaa
cagctacgtgacggcctgttggcgaatttttcaggctatgacgaactaagaagagactgc
ctgaatgcgccgaaatacggcaatgatgataacgcagtcgaccagcttgcgcgggatatc
accgaatggacggaaaaggagtgtcgtcagtacaaaatgctctactccacgtttagccac
ggcacgttatcaatctcgaacaacacgccaattggtgaactgacggcagccagcgcgaat
ggccgactggcatgggcaccactctccgatgggatcagcccaacgcaaggggctgacaaa
aaagggccaacagcgagcatcaaatctgtcagcaaaatgaatgtggaaagcatgaacatc
ggcatggtgcataacttcaaattccttaaaggcatgctggatacgccagaaggccgaaac
ggcttgatttccctgctgagaacatcgtccattctgggtaatgggcagatgcaattcagc
tacgttgacgatgaagtattgagaaaagcccaacaaacgccggagcaataccgtgatttg
atcgtgcgtgtcgcgggatacagcgcctacttcgttgaattatgcaaggaagttcaggat
gagatcattagccgcactatgatcgataagttctga
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