Pectobacterium brasiliense: B5S52_04310
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Entry
B5S52_04310 CDS
T06364
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pbra
Pectobacterium brasiliense
Pathway
pbra00300
Lysine biosynthesis
pbra00470
D-Amino acid metabolism
pbra01100
Metabolic pathways
pbra01110
Biosynthesis of secondary metabolites
pbra01120
Microbial metabolism in diverse environments
pbra01230
Biosynthesis of amino acids
Module
pbra_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
B5S52_04310
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
B5S52_04310
Enzymes [BR:
pbra01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
B5S52_04310
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Ortholog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ARA75153
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All DBs
Position
935296..936558
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AA seq
420 aa
AA seq
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MPHDLNDVTHALNAQSLRELPARFGCPVWAYDAQTIVNRIAQLRQFDTIRFAQKACSNTH
ILRLMREQGVKVDSVSLGEIERALIAGFVPGTDAHEIVFTADLLDRPTLQRVSELNIPVN
AGSVDMLEQLGQQSPGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWYGDLPLALAHIQR
YQLKLVGIHMHIGSGVDYGHLEQVCEAMVQQVVELGQDIEAISAGGGLSIPYRHGEEAID
TEHYYGLWNAAREKIAAHLGHPVTLEIEPGRFLVAESGVLVAEVRAVKSMGSRHFVLVDA
GFNDLMRPAMYGSYHHVSLLPGDGRDISQSTLRDSVIAGPLCESGDVFTQQAGGGVETFA
LPDAQVGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFENGEPRLIRRRQTLDELLALEAL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgccacacgatctgaatgacgtaacccacgccctgaacgcgcaaagtctgcgtgaactg
cctgcccgctttggttgcccggtttgggcctatgacgcgcagaccatcgttaaccgcatc
gcccaactacgccagttcgacacaatccgcttcgcgcagaaggcgtgttccaacacgcac
attttgcgcctgatgcgtgagcagggtgtgaaagtggattcggtctcgctgggtgagatc
gagcgtgcgctgattgcggggtttgttccgggcaccgatgcgcatgagatcgtatttact
gccgatctgctggatcgtccgacgttgcaacgcgtttccgaactgaacattccggtgaac
gccggctcggtcgatatgctggaacaacttgggcagcagtcgccggggcatccggtgtgg
ctgcgtgtgaatccgggctttggtcatggtcacagccagaaaaccaacaccggcggtgag
aacagcaagcacgggatctggtacggcgacttgccgctggcgctggcgcacattcagcgc
tatcagctgaagctggtgggaatccacatgcacattggttctggcgtcgattacggccat
ctggaacaggtgtgcgaggcgatggtgcagcaggtcgttgaactgggtcaggatatcgag
gcgatttcagcgggcggcgggctgtcgattccctatcgccacggtgaagaagcgattgat
accgaacactattacgggctgtggaacgcggcgcgtgagaaaattgccgcgcatctcggt
cacccggtgacgctggaaatcgagccaggacgttttctggtcgcggagtctggcgtgctg
gtggcggaagttcgggccgtcaaatccatggggagtcgccactttgtgctggtcgatgcc
gggtttaacgatctgatgcgtccggcaatgtacggcagctatcaccacgtttctttgctg
ccgggcgatggccgcgatatcagccagtccacgttgcgcgacagcgtgattgctgggccg
ctgtgtgaatccggcgatgtgtttacccagcaggcgggtggcggcgtggaaacgttcgcg
ctaccggatgcacaggttggcgactatctggtcttccatgataccggcgcgtacggcgca
tcgatgtcctcgaactacaacagccgtccgctgctgccagaagtgctgttcgaaaacggt
gaaccgcgcctgattcgccgtcgccagacgctggatgagctgctggcactggaagcgctt
taa
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