Pectobacterium brasiliense: B5S52_05515
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Entry
B5S52_05515 CDS
T06364
Name
(GenBank) AAA family ATPase
KO
K11908
sigma-54 dependent transcriptional regulator
Organism
pbra
Pectobacterium brasiliense
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbra03000
]
B5S52_05515
Transcription factors [BR:
pbra03000
]
Prokaryotic type
Helix-turn-helix
Other families
B5S52_05515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA_16
AAA_2
Mg_chelatase
HTH_8
AAA_3
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ARA75370
LinkDB
All DBs
Position
1201795..1203333
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AA seq
512 aa
AA seq
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MQHALELALALTRQHDEAGLCDWLLETMQAAWQPQGMLLGMVDVSGRQLTCQGRVHETPV
ALSLGVDDFSHPLAYALHKNQARTWDSLYGGARIEHREFRQMLVSVGTNCGLHALPLLSE
SGKPLAVLALLDTPMRLQTLHQRGECERLAQVFCRQLMLLRELAHTRREQVALRDSLRQI
KDEGQSRREQETRVEATLIGRSVVIKELHQQIYQAAKHRLSVLIQGETGSGKDVVARLLH
QCSERADKPFIAINCAAIPENLIESELFGYQKGAFSGAQSNKIGLVEQANGGTLFLDEVG
DMPQSMQAKLLRVLETHSFRPLGAEKEVHSDFRLIAATHQPLEQQVSDGVFRQDLYHRLC
QCLLQVAPLRERPDDIRLLCEHFIGQFADKQQKHVGPLNRAFLRQLVAYDFPGNVRELRN
LLEVACAHTPDGEALSLASLPPELRERLTSSPPEEQDRYQHIHDLRIATQRYEAAVIEAR
LRQFQGNRLLVADSLNIPKRTLDHKCQKLEVN
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatgccctcgaactggcgcttgcactcactcgacagcatgacgaggccggtctg
tgcgactggctgctggagacgatgcaggccgcctggcagcctcaagggatgctactgggt
atggtggatgtcagcggcaggcaactgacctgccaggggcgagtgcatgaaacgccggtg
gcgctgagtctgggcgtggatgactttagccacccgctggcttatgcgctgcataagaat
caggcgcgcacctgggattctctctatggcggtgcccgcattgagcaccgtgaattccgg
cagatgctggtttctgtcgggacgaactgcgggctgcatgcgctaccgctgctgtcggag
agcggtaaaccgctggcagtgctggcgctgttggatacgccgatgcgcctgcaaacgctg
catcagcgcggcgagtgtgagcggctggcgcaggtgttttgccgtcagcttatgttgctg
cgtgagctggcacatacccggcgggagcaggtcgcgctgagagattcactccgccagatt
aaggatgaagggcagagccgtcgcgagcaggaaacgcgggtggaagcgacgctgattggt
cgatctgtcgtcattaaagagctgcatcagcagatttatcaggcggcaaaacaccgtctt
tcggtgctgattcagggcgaaaccggttcagggaaagatgtggtcgcgcgtctgctgcat
cagtgttccgaacgcgcagacaagccctttattgccatcaactgcgcggcgatcccggaa
aatctgattgaaagcgaactgtttggctaccagaaaggcgcgttctccggcgcacagagc
aacaagattggtctggtcgagcaggctaacggcggaaccctgtttttggatgaagtcggc
gatatgccgcagtccatgcaggccaagctgttaagggtgctggaaacgcatagcttccgt
cccctcggtgcggagaaagaagtgcattccgatttccgcctgattgccgcgacccatcag
ccgctggaacagcaggtgtctgacggcgtatttcggcaggatctctatcatcgcctttgt
cagtgcctgttgcaggtcgccccgctgcgcgagcggccggacgatattcgtctgctgtgc
gagcacttcatcggtcaatttgcagataaacagcaaaagcacgttgggccgttgaaccgt
gctttcctgcgccaactggtggcgtacgactttcccggcaatgtgcgggaactgcgcaat
ctgctggaagtcgcctgtgctcatacgccggacggtgaggcgctgtctctggcatcgctg
ccgccggaactgcgcgagcggctgaccagcagcccgcctgaagaacaggatcgctatcag
cacatccacgatttgcgtattgccacacagcggtatgaagcggctgtcattgaggcacgc
ctgcgccagtttcagggtaaccgcctgctggtggccgatagcctcaatatccctaaacgc
actctcgaccacaaatgccagaagctggaggtaaattga
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