Pectobacterium brasiliense: B5S52_06115
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Entry
B5S52_06115 CDS
T06364
Name
(GenBank) carbohydrate diacid regulon transcriptional regulator CdaR
KO
K02647
carbohydrate diacid regulator
Organism
pbra
Pectobacterium brasiliense
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbra03000
]
B5S52_06115
Transcription factors [BR:
pbra03000
]
Prokaryotic type
Helix-turn-helix
Other families
B5S52_06115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
GAF
GAF_2
Motif
Other DBs
NCBI-ProteinID:
ARA75468
UniProt:
A0A086E382
LinkDB
All DBs
Position
1327786..1328943
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AA seq
385 aa
AA seq
DB search
MASYHLNAKMAQDIVARTMQIIDSNINVMDARGKIIGSGDQERLGELHEGALLALSQGRV
VDIDDAVARHLHGVRPGINLPLRIDGEIVGVIGLTGNPSQLRQYGELVCMTAEMMLEQAR
LLHMLAQDSRLREELVLNLIRTDDLSPALMEWAQRLGIDLNKPRVAAVIEVDSGQLGVDS
AMAELQQLQTLLTTPERDNLIAIVSLTEMVVLKPALNSHGRWDAEEHRRRVDTLMSRMAE
SSRLRVRLALGNYFSGPGSIARSYRTARTTMSVGKQRMPAQRCYYYQDLMLPVLLDSLRG
GWQANELVRPLSKLKAMDGNGLLRRTLGAWFRNNVQPGATAKALFIHRNTLEYRLNRISE
LTGLDLGNFDDRLLLYVALQLDEEE
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtatcatctcaatgccaagatggcacaggatattgtcgcgcggaccatgcag
atcattgatagcaatatcaacgtgatggatgctcgcggtaagattatcggcagtggcgat
caggaacgattgggggaactgcacgaaggcgcactgctggcgctttcgcaggggcgagtc
gtcgatattgatgatgctgtagcgcgtcacctgcacggcgtgcgtccgggtatcaattta
cctttgcgcatcgacggtgaaatcgttggcgtcatcggcctgaccgggaatcccagccag
ctacggcaatacggcgagcttgtctgcatgacggcggaaatgatgctggagcaggcgagg
ctgttgcatatgctggcgcaggatagccgcctgcgtgaagagctggttctgaacctgatt
cgtaccgacgatctgtctcccgctctcatggagtgggcgcagcgtttaggcatcgatcta
aataagcctcgcgtcgctgcggtgatcgaagtggacagcgggcagctcggcgttgactct
gccatggcagagctacagcagttgcagacgttgctgaccacgccggaacgcgacaacctg
atcgctatcgtttctctgacggaaatggtggtgctaaaaccggcgctgaacagccacggg
cgctgggatgcagaggaacaccggcgtcgcgtggatacgctgatgtcgcgtatggcggaa
agcagtcggctacgggtacggctggcgctggggaactatttttctggccccggcagtatc
gcgcgctcctaccgcacggcacgaacgaccatgagcgtaggtaagcagcgcatgcctgcc
cagcgctgttattactatcaggatttgatgttacccgtgctgctggacagcctgcgcggc
ggctggcaggcaaacgagctggtgcgtccgctctcgaagcttaaagcaatggacggcaat
ggtctgctgcgtcggacgttgggtgcctggttccgtaacaacgtccagcccggtgcgacg
gcgaaagcgctgtttatccaccgtaatacgctggaatatcgccttaatcgtatctctgaa
ctaacggggttagatctggggaatttcgacgaccgtctgctgctgtacgtagctttgcaa
ctggacgaagaagagtag
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