Pectobacterium brasiliense: B5S52_06210
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Entry
B5S52_06210 CDS
T06364
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pbra
Pectobacterium brasiliense
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbra03009
]
B5S52_06210
Enzymes [BR:
pbra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B5S52_06210
Ribosome biogenesis [BR:
pbra03009
]
Prokaryotic type
rRNA helicases
B5S52_06210
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ARA75481
UniProt:
A0A7V8TKW6
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All DBs
Position
complement(1342503..1343828)
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AA seq
441 aa
AA seq
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MTVTNFSELDLDESLLDALRDMGYERPTVIQAEAIPPAMEGRDVLGSAPTGTGKTAAYLL
PVLQHLIDFPRKKSGPPRILILTPTRELAMQVADQARAFAAHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIKDFAERLLNEPVEIESDPSRRERKKILQWYYRADDLKHKTALLC
HQLKQPDVTRSIVFVRKRERVHELVAWLREAGINSCYLEGEMVQAKRNEAIKRLSDGRVN
VLVATDIAARGIDIDDVSHVFNFDLPRTADTYLHRIGRTGRAGRKGCAISFVEAHDHLLL
GKISRYLNEPLKPRVIEELRPATKAPSAKTTGKPSKKVLAKRQEKKEKEKEKVKVKVRHR
DAKNIGKRRQPTQKTDEPSAE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaaccaatttttccgagcttgatcttgatgaaagcctgttagacgccttgcgc
gacatgggctacgagcgcccgaccgtgattcaagctgaggcgatccctccggcaatggaa
ggccgcgacgtactgggctccgcgccaacaggaacaggtaaaaccgccgcctatctgctg
ccggttttgcagcatcttatcgatttccctcgtaaaaaatcgggtccacctcgtattctg
atcctcacaccaacccgtgaactcgccatgcaggtagccgatcaggcgcgagcgtttgca
gcgcatacgcatctggatatcgccacgatcacaggcggcgtggcctacatgaaccacgca
gaagtcttcagtgaaaatcaggatatcgtcgtcgcgacgacgggccgtctgctgcaatac
attaaagaagaaaatttcgattgccgcgcggtagaaacactgattctggatgaagcagac
agaatgctggatatgggcttcgctcaggatattgaacacatcgccggagaaacccgctgg
cgcaagcaaacgatgctgttttctgcgacgctggaaggggacgcgatcaaagatttcgcc
gagcgcttgctcaacgagcccgttgaaatcgaatccgacccatcgcgtcgggaacgtaaa
aaaattctgcaatggtattaccgcgctgacgatctcaaacacaaaacagcgctgctctgc
caccagttaaaacaaccggatgtgacgcgttctatcgtctttgtacgcaagcgtgagcgt
gtgcatgagctggttgcctggctgcgtgaagcgggcattaactcctgctacctcgaaggc
gaaatggtgcaggccaaacgtaatgaggcgatcaaacgtctgagcgacgggcgtgtcaac
gtgctggtggcaaccgatatcgccgcgcgcggtattgatattgacgatgtcagccacgta
tttaacttcgacttaccgcgcacagccgatacttaccttcaccgtatcggccgtactggc
cgcgccggtcgtaaaggctgtgctatctctttcgttgaagcgcacgaccatctgctgctg
ggaaaaatcagtcgctacttgaatgaaccgctaaaaccgcgcgtcattgaagaacttcgc
ccggcgactaaagcgccaagcgccaaaacgacggggaaaccgtcgaaaaaagtgctggct
aagcgacaagagaaaaaagagaaggaaaaagaaaaagttaaggtaaaagttcgtcatcgc
gatgctaaaaatattggtaagcgtcgtcaaccaacgcagaaaaccgacgaaccctctgcc
gagtaa
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