Pectobacterium brasiliense: B5S52_07380
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Entry
B5S52_07380 CDS
T06364
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
pbra
Pectobacterium brasiliense
Pathway
pbra00071
Fatty acid degradation
pbra00280
Valine, leucine and isoleucine degradation
pbra00310
Lysine degradation
pbra00362
Benzoate degradation
pbra00380
Tryptophan metabolism
pbra00410
beta-Alanine metabolism
pbra00640
Propanoate metabolism
pbra00650
Butanoate metabolism
pbra00907
Pinene, camphor and geraniol degradation
pbra00930
Caprolactam degradation
pbra01100
Metabolic pathways
pbra01110
Biosynthesis of secondary metabolites
pbra01120
Microbial metabolism in diverse environments
pbra01200
Carbon metabolism
pbra01212
Fatty acid metabolism
Module
pbra_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
B5S52_07380
00650 Butanoate metabolism
B5S52_07380
09103 Lipid metabolism
00071 Fatty acid degradation
B5S52_07380
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
B5S52_07380
00310 Lysine degradation
B5S52_07380
00380 Tryptophan metabolism
B5S52_07380
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
B5S52_07380
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
B5S52_07380
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
B5S52_07380
00930 Caprolactam degradation
B5S52_07380
Enzymes [BR:
pbra01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
B5S52_07380
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
B5S52_07380
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
B5S52_07380
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
ARA75702
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All DBs
Position
1614836..1617052
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AA seq
738 aa
AA seq
DB search
MNDQQPFSVTTSSAIETTSSVTKSPSAFSLTIRPDNIGVICIDVPGEKVNTLKSEFAEQI
LSVFEQARQHATLRGLIFISAKPDSFIAGADITMLNQCSSAEQAENLAKQGQETFDQVAA
LPFPVVAAIHGACLGGGLELALACDYRVCSLDEKTVLGLPEVQLGLLPGSGGTQRLPRLI
GLDSALDLILTGRHLRASQALRQGLVDEAVPHDILLETAVEILKKGKRKAVPLGWRSRLL
SSPGIRDVLFKIVKRKTRAKTHGNYPATEKIIQVVRRGIEKGREEGYRHEARAFGKLVMT
PESAALRHLFFASNALKKTAGADSEAKPIHRVGILGGGLMGGGIASVTATRGQLPVRIKD
INEQGINHALKYNWQLLTKRVQSKRMKPTERQRLMTLISGSTDYRGFEHADIVIEAVFED
LALKRQMVAEIEEHAAPHTIFASNTSSLPIHQIAEGARRPQQVVGLHYFSPVDKMPLVEV
IPHAHTSAETVATTVALVRKQGKTAIVVGDSAGFYVNRILAPYINEAAYCLLEGEPIESI
DYALVRFGFPVGPLALLDEVGIDVATKIVPVLSEELGKRFTSPPAFDAILKDGRKGRKNG
KGFYRYNKTRRFWQAGREVDSSVYPLLDVTAKAHIDPALISQRAVMMMLNEAARCLDEGV
IQCARDGDIGAVFGIGFPPFLGGPFHYMDRLGVETVVKTLLVLQQQYGDRFAPCERLLAM
REGRRTFYPPTSEDQSAS
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcaacagcctttctccgtgacaacatcgtctgcaatcgaaacaacatcatcg
gtgacgaaaagcccctccgccttttccctaacgattcggccggacaatatcggtgttatt
tgcattgatgttcccggcgagaaggtgaacacgctaaagagcgaatttgcagaacagatt
ctttcggtcttcgagcaggcgcggcagcatgcgacgctcagggggctgatttttatttcc
gccaagcctgattcgtttatcgccggtgcggatatcaccatgttgaatcagtgcagtagt
gccgaacaggcagaaaatctggcgaaacaagggcaggaaacgttcgatcaggtagccgcg
ctgccgttccccgtagtggctgcgatccacggtgcctgtttgggcggtgggctggagttg
gcattggcctgcgactatcgcgtctgctcgctggatgaaaaaacggtactggggctaccg
gaagtacagcttggcctgcttcccggttcaggcggaacgcagcgtttgccacggctgatt
ggtctggatagcgcgctggatctcattctgaccggccgccacctccgtgcgagtcaggcg
ttacgacaagggctggttgatgaggccgtcccgcacgatatcctgctggagacggcggtc
gaaattctcaaaaaaggaaaacgcaaagccgtgccgctgggctggcgttcgcgtttgctg
agtagcccaggtattcgcgatgtattgttcaaaatagtgaaacgcaaaacgcgagcgaaa
acacacggcaactatccggccacggaaaaaatcattcaggtggtgcgtcggggcatagaa
aaaggtcgtgaggaagggtatcggcacgaggcgcgagcgtttggcaaactggtgatgacg
ccggaatcggccgcgctacgccatctgttctttgcctccaatgcattaaagaaaaccgcc
ggtgcggactctgaagcgaagccgatccaccgcgtcggtattctcggcggtgggctgatg
ggcggtgggatcgccagcgtgacggcgacgcgcgggcagttaccggtgcgtattaaagat
atcaatgaacagggcattaaccatgcgctgaagtacaactggcagttgctgaccaaacgc
gttcagagtaagcggatgaagccgacggagcgccagcggttgatgacgttgatttccggt
agtacggactatcgcggttttgaacatgcggatatcgtcattgaggccgtttttgaagat
ctggcgctgaagcggcagatggtggcggagattgaagagcacgctgcgccgcacacgatt
tttgcatcgaatacttcctcgctgccgatccatcagattgcagagggcgcgcgccgtccg
caacaggttgtgggtctgcactactttagcccggtggacaaaatgccgctggttgaggtg
attcctcacgcacacaccagcgcagagacggtggcgacgacggtggcgctggtgagaaag
caggggaaaaccgcgatcgtcgtaggcgacagcgctggtttttatgtgaaccgcatatta
gcgccttatatcaacgaagcggcttattgcctgctggaaggggagccgattgaatcgatc
gattatgcgctggtgcgctttggcttccccgttggtccgctggcgctgcttgatgaggtt
ggcattgatgtggcgaccaaaattgtaccggtgctgagtgaagaactgggcaagcgcttc
acctctccacccgcgtttgatgcgatcctgaaagatggacgcaaagggcgcaagaatggg
aaagggttctatcgatacaataaaacgcgccgtttctggcaggcgggcagagaggtggat
agctcggtttatccgctgctggacgtcacggcgaaggctcatattgaccctgcgctcatc
agccagcgtgccgtgatgatgatgctgaatgaggcagcgcgttgtctggatgaaggcgtg
atccagtgcgctcgcgatggcgatatcggcgcggtatttggcattggcttcccacctttc
ctcggcgggccgttccactatatggaccgtctgggagtggaaacggtcgtgaaaacgctg
ctggtgctgcaacaacagtatggcgatcggttcgcaccctgtgaacgtctgctcgcgatg
cgggaaggtcgacggacgttttatccgccaacctctgaagatcagagcgctagttga
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