KEGG   Pectobacterium brasiliense: B5S52_08640
Entry
B5S52_08640       CDS       T06364                                 
Symbol
helD
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
pbra  Pectobacterium brasiliense
Brite
KEGG Orthology (KO) [BR:pbra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pbra03400]
    B5S52_08640 (helD)
Enzymes [BR:pbra01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     B5S52_08640 (helD)
DNA repair and recombination proteins [BR:pbra03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    B5S52_08640 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_12 AAA_30 ResIII DEAD RNAseD_HRDC_C
Other DBs
NCBI-ProteinID: ARA75933
LinkDB
Position
1886581..1888638
AA seq 685 aa
MELKSTSLGKHLAQHPYNRVRLLNAGVEVSGDKHQYLIPFNQLLSIHCKRGLVWGELEFE
LPAGKVVRLHGTEWQETQAFYRHLLKSWLDWSEEMSLISAEVLQRQTDTIHTLTQQDKWF
SRQALTTLQNAIRDSLGALPLPVSRLETFDNCRDNYWHCLRWLEQGDEMRTAVNQAWMDR
TLAAEQPFFETVESSPLNVSQSKAVINGEEGVLVLAGAGSGKTSVLVARAAWLMHRQEAR
PDQILLLAFGRKAAEEMNDRIRERLHTDEIQAKTFHALALHIIQQASRKAPMISQLESDA
KQRRELLVSHWQQQCAEKKTQANGWRRWLTEELEWDVPEGDFWNDPKLAGRLAGRLERWL
ALMRMHGGSQSEMVEQAPESIRAEFQQRIRLMAPLLKAWKKALKDENAVDFSGLIHQAVN
LLDKGRFVSPWKHILVDEFQDISPQRASLLAALRRQNSRTCLFAVGDDWQAIYRFSGAEL
ALTTAFEQHFGVGEQCALDTTYRFNERIGEIANTFIQQNPYQLKKPLNSLSKGDKKAVTI
LPQEQLEPLLDKLSGFVKADERILVLARYHHLRPAILEKAATKWPNLHIDFMTVHASKGQ
QAEYVIIVGMHEGKDGFPAPARESVIEAVLLPEPEDFPDAEERRLLYVALTRAKHRVWLL
QDVANPSVFIEHLHRLGVPTQRKPG
NT seq 2058 nt   +upstreamnt  +downstreamnt
atggaactgaaatctacctcgttaggtaaacatctggcccagcatccttacaatcgggtg
cggttactgaatgccggtgtcgaagtgagtggcgataaacatcaatacctgatccccttt
aatcagttgctgagtattcattgtaaaagagggctggtgtggggagagctggaatttgaa
ttaccagccggaaaagtggtgcgcctgcacggaacagagtggcaggaaacgcaggctttt
taccgccatcttcttaaatcctggctcgactggagtgaggagatgagtctgatcagcgct
gaagttttacagcgccaaacggacactattcacacgctgacgcagcaggacaaatggttt
agtcgtcaggctctgactacgttgcagaatgccattcgcgattcgctgggggctttgccc
ctgcctgtttctcgtcttgagacttttgataactgccgtgataactactggcactgctta
cgctggcttgagcagggtgatgagatgcgcactgcggtgaatcaggcatggatggatcgc
acactggcggcagagcagcctttctttgaaacggtggagagttcgccattaaatgtgtcg
cagagtaaagcggtgatcaatggcgaagaaggcgtactggtactggccggggcgggcagc
ggcaaaacctccgtgctggtggcccgagcggcgtggttaatgcaccgacaagaggctagg
cccgatcaaattttgctactggcatttggtcgtaaagcggcagaagagatgaacgatcgc
attcgggagcggcttcatacggatgagattcaggctaagacgttccatgcgctggcattg
cacattattcagcaggctagccgcaaggccccgatgataagccaactggaaagtgatgcg
aaacagcgtcgcgaactgctggtttctcactggcagcagcagtgtgcagagaaaaaaacg
caggctaacgggtggcgacgctggttaacggaagagctggaatgggatgtaccagaaggc
gatttctggaacgacccgaagctggcagggcggttggccgggcgacttgagcgctggttg
gcattgatgcgtatgcacggcggcagccagagtgaaatggttgagcaggcaccagaatcc
attcgggcagagtttcagcaacgtatacgcctgatggcaccgctgttgaaagcctggaaa
aaagcgcttaaggacgagaacgccgtcgacttctctggccttatccatcaggccgtgaac
ttgctggataaagggcgctttgtaagcccttggaagcacattctggtggacgaatttcag
gatatttcgccacagcgtgcgagcttgcttgcagctctgcgtcgacaaaatagccgtacc
tgtctttttgccgtcggggatgactggcaggccatttaccgttttagcggtgctgagctg
gcgttgacgacggcatttgaacagcatttcggcgtaggcgagcaatgcgcgctggatacg
acctatcgctttaatgaacgcattggtgaaatcgccaacacgttcatacagcaaaacccg
tatcagttgaagaaaccgcttaatagcctgagtaagggagataaaaaagcggtgactatt
ctacctcaggagcagcttgagccacttctggataaactgagcggttttgtgaaagctgat
gaacgcattctcgtgcttgcgcgttatcaccatttacgcccagcgattttggagaaggcg
gcaaccaaatggccgaatttgcacattgatttcatgacggtgcatgccagtaaagggcag
caggcggaatatgtcattatcgtaggcatgcatgaagggaaggacggcttcccggcgccg
gcaagagagtcggtgattgaggcggtgctgttacctgaaccggaggacttccccgatgcg
gaagagcggcgtttgctctatgtggcgttgacgagggcgaagcatcgcgtgtggttgcta
caggatgtggcgaatccatcggtgtttattgaacatctccatcgtttaggtgtaccgacg
cagcgtaagccgggataa

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